RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 RGPD1P0DJD0 1748 aa20.9■□□□□ 0.94
NELFA-216ENST00000542778 ZSCAN20P17040 1043 aaPredicted RBP20.9■□□□□ 0.94
NELFA-216ENST00000542778 FGD1P98174 961 aa20.9■□□□□ 0.94
NELFA-216ENST00000542778 CHD1LQ86WJ1 897 aa20.9■□□□□ 0.94
NELFA-216ENST00000542778 ZBTB40Q9NUA8 1239 aa20.9■□□□□ 0.94
NELFA-216ENST00000542778 CCDC39Q9UFE4 941 aa20.89■□□□□ 0.94
NELFA-216ENST00000542778 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
NELFA-216ENST00000542778 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
NELFA-216ENST00000542778 SBNO1A3KN83 1393 aa20.88■□□□□ 0.93
NELFA-216ENST00000542778 FLT4P35916 1363 aa20.88■□□□□ 0.93
NELFA-216ENST00000542778 EYA1Q99502 592 aa20.88■□□□□ 0.93
NELFA-216ENST00000542778 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
NELFA-216ENST00000542778 CYP2E1P05181 493 aaPredicted RBP20.87■□□□□ 0.93
NELFA-216ENST00000542778 KIF16BQ96L93 1317 aa20.87■□□□□ 0.93
NELFA-216ENST00000542778 LMOD2Q6P5Q4 547 aa20.87■□□□□ 0.93
NELFA-216ENST00000542778 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
NELFA-216ENST00000542778 TMEM57Q8N5G2 664 aa20.87■□□□□ 0.93
NELFA-216ENST00000542778 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
NELFA-216ENST00000542778 HOXC9P31274 260 aa20.86■□□□□ 0.93
NELFA-216ENST00000542778 NUCB2P80303 420 aa20.86■□□□□ 0.93
NELFA-216ENST00000542778 MCM10Q7L590 875 aa20.86■□□□□ 0.93
NELFA-216ENST00000542778 TSPYL6Q8N831 410 aa20.86■□□□□ 0.93
NELFA-216ENST00000542778 TMEM94Q12767 1356 aa20.86■□□□□ 0.93
NELFA-216ENST00000542778 IL16Q14005 1332 aa20.85■□□□□ 0.93
NELFA-216ENST00000542778 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
NELFA-216ENST00000542778 RBM27Q9P2N5 1060 aaKnown RBP20.85■□□□□ 0.93
NELFA-216ENST00000542778 GPT2Q8TD30 523 aa20.84■□□□□ 0.93
NELFA-216ENST00000542778 MBIPQ9NS73 344 aa20.84■□□□□ 0.93
NELFA-216ENST00000542778 LTN1O94822 1766 aa20.84■□□□□ 0.93
NELFA-216ENST00000542778 MYRIPQ8NFW9 859 aa20.84■□□□□ 0.93
NELFA-216ENST00000542778 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
NELFA-216ENST00000542778 LRSAM1Q6UWE0 723 aa20.83■□□□□ 0.92
NELFA-216ENST00000542778 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.92
NELFA-216ENST00000542778 C1orf167Q5SNV9 1468 aa20.82■□□□□ 0.92
NELFA-216ENST00000542778 PKP1Q13835 747 aa20.82■□□□□ 0.92
NELFA-216ENST00000542778 KRT24Q2M2I5 525 aa20.82■□□□□ 0.92
NELFA-216ENST00000542778 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
NELFA-216ENST00000542778 PRPF40AO75400 957 aaKnown RBP20.81■□□□□ 0.92
NELFA-216ENST00000542778 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
NELFA-216ENST00000542778 ZNF853P0CG23 659 aa20.8■□□□□ 0.92
NELFA-216ENST00000542778 KIAA2012Q0VF49 1180 aa20.8■□□□□ 0.92
NELFA-216ENST00000542778 ZNF710Q8N1W2 664 aa20.8■□□□□ 0.92
NELFA-216ENST00000542778 IGSF1Q8N6C5 1336 aa20.8■□□□□ 0.92
NELFA-216ENST00000542778 C8orf58Q8NAV2 365 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 MIS18AQ9NYP9 233 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 TMEM63CQ9P1W3 806 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 LMTK3Q96Q04 1460 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 NFAT5O94916 1531 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 SYCE3A1L190 88 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 RABEP1Q15276 862 aa20.79■□□□□ 0.92
NELFA-216ENST00000542778 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
NELFA-216ENST00000542778 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
NELFA-216ENST00000542778 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
NELFA-216ENST00000542778 KRT28Q7Z3Y7 464 aa20.78■□□□□ 0.92
NELFA-216ENST00000542778 STRCQ7RTU9 1775 aa20.78■□□□□ 0.92
NELFA-216ENST00000542778 JARID2Q92833 1246 aaPredicted RBP20.78■□□□□ 0.92
NELFA-216ENST00000542778 RGPD2P0DJD1 1756 aa20.77■□□□□ 0.92
NELFA-216ENST00000542778 VAMP4O75379 141 aa20.77■□□□□ 0.91
NELFA-216ENST00000542778 IFT57Q9NWB7 429 aa20.77■□□□□ 0.91
NELFA-216ENST00000542778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.77■□□□□ 0.91
NELFA-216ENST00000542778 CDC45O75419 566 aa20.76■□□□□ 0.91
NELFA-216ENST00000542778 LRRC59Q96AG4 307 aaKnown RBP20.76■□□□□ 0.91
NELFA-216ENST00000542778 CFAP44Q96MT7 982 aa20.76■□□□□ 0.91
NELFA-216ENST00000542778 KDRP35968 1356 aa20.76■□□□□ 0.91
NELFA-216ENST00000542778 MST1RQ04912 1400 aa20.76■□□□□ 0.91
NELFA-216ENST00000542778 ATF3P18847 181 aa20.76■□□□□ 0.91
NELFA-216ENST00000542778 GNAI1P63096 354 aa20.76■□□□□ 0.91
NELFA-216ENST00000542778 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
NELFA-216ENST00000542778 KIF20AO95235 890 aa20.75■□□□□ 0.91
NELFA-216ENST00000542778 GCP02774 474 aa20.75■□□□□ 0.91
NELFA-216ENST00000542778 TSC1Q92574 1164 aa20.75■□□□□ 0.91
NELFA-216ENST00000542778 GCC1Q96CN9 775 aa20.75■□□□□ 0.91
NELFA-216ENST00000542778 PRIMPOLQ96LW4 560 aa20.75■□□□□ 0.91
NELFA-216ENST00000542778 GTF2F1P35269 517 aaKnown RBP eCLIP20.75■□□□□ 0.91
NELFA-216ENST00000542778 CBX1P83916 185 aa20.75■□□□□ 0.91
NELFA-216ENST00000542778 CWC22Q9HCG8 908 aaKnown RBP20.75■□□□□ 0.91
NELFA-216ENST00000542778 XIRP1Q702N8 1843 aaKnown RBP20.74■□□□□ 0.91
NELFA-216ENST00000542778 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
NELFA-216ENST00000542778 NBPF6Q5VWK0 638 aa20.74■□□□□ 0.91
NELFA-216ENST00000542778 NBPF4Q96M43 638 aa20.74■□□□□ 0.91
NELFA-216ENST00000542778 NSFL1CQ9UNZ2 370 aaKnown RBP20.74■□□□□ 0.91
NELFA-216ENST00000542778 ZDHHC9Q9Y397 364 aa20.74■□□□□ 0.91
NELFA-216ENST00000542778 ZNF335Q9H4Z2 1342 aaPredicted RBP20.74■□□□□ 0.91
NELFA-216ENST00000542778 PTMAP06454 111 aaKnown RBP20.73■□□□□ 0.91
NELFA-216ENST00000542778 PPP4R3BQ5MIZ7 849 aa20.73■□□□□ 0.91
NELFA-216ENST00000542778 RNF214Q8ND24 703 aa20.73■□□□□ 0.91
NELFA-216ENST00000542778 DNTTIP2Q5QJE6 756 aaKnown RBP20.73■□□□□ 0.91
NELFA-216ENST00000542778 LMOD3Q0VAK6 560 aa20.72■□□□□ 0.91
NELFA-216ENST00000542778 IP6K1Q92551 441 aa20.72■□□□□ 0.91
NELFA-216ENST00000542778 AXIN2Q9Y2T1 843 aa20.72■□□□□ 0.91
NELFA-216ENST00000542778 HMGN5P82970 282 aaKnown RBP20.72■□□□□ 0.91
NELFA-216ENST00000542778 ATP2B3Q16720 1220 aa20.71■□□□□ 0.91
NELFA-216ENST00000542778 TWISTNBQ3B726 338 aaPredicted RBP20.71■□□□□ 0.91
NELFA-216ENST00000542778 CABLES1Q8TDN4 633 aa20.71■□□□□ 0.91
NELFA-216ENST00000542778 LETM1O95202 739 aaPredicted RBP20.71■□□□□ 0.91
NELFA-216ENST00000542778 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
NELFA-216ENST00000542778 ZGPATQ8N5A5 531 aaKnown RBP20.7■□□□□ 0.9
NELFA-216ENST00000542778 CHAMP1Q96JM3 812 aa20.7■□□□□ 0.9
NELFA-216ENST00000542778 CRB1P82279 1406 aa20.69■□□□□ 0.9
NELFA-216ENST00000542778 PIBF1Q8WXW3 757 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms