RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 NEFMP07197 916 aa16.24■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 HSPA1AP0DMV8 641 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 HSPA1BP0DMV9 641 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 TOM1L2Q6ZVM7 507 aa16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 EYA1Q99502 592 aa16.21■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 AXIN2Q9Y2T1 843 aa16.21■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 RGPD2P0DJD1 1756 aa16.21■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 HMOX1P09601 288 aa16.18■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 CCDC27Q2M243 656 aa16.18■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 CCDC146Q8IYE0 955 aa16.18■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 LY75O60449 1722 aa16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 EXOC5O00471 708 aa16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 APAF1O14727 1248 aa16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 FSTL1Q12841 308 aa16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 LTV1Q96GA3 475 aaPredicted RBP16.17■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 NBPF6Q5VWK0 638 aa16.16■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 AEBP1Q8IUX7 1158 aa16.16■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 NBPF4Q96M43 638 aa16.16■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 CSB-PGBD3P0DP91 1061 aa16.15■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
CACNA1C-IT3-201ENST00000542680 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 NFE2L2Q16236 605 aa16.14■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 NLRP2Q9NX02 1062 aa16.13■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 AMOTQ4VCS5 1084 aa16.12■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 MSL1Q68DK7 614 aa16.12■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 ADRA2BP18089 450 aa16.11■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 COL23A1Q86Y22 540 aaPredicted RBP16.11■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 WWC1Q8IX03 1113 aa16.1■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 RAPGEF4Q8WZA2 1011 aa16.1■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 HTATSF1O43719 755 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 KCNQ4P56696 695 aa16.09■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 RIPK4P57078 832 aa16.09■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 IL16Q14005 1332 aa16.09■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 TNRC18O15417 2968 aaPredicted RBP16.09■□□□□ 0.17
CACNA1C-IT3-201ENST00000542680 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 MEGF6O75095 1541 aa16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 KIAA1551Q9HCM1 1747 aa16.06■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 ADAMTS7Q9UKP4 1686 aa16.06■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 RRP7AQ9Y3A4 280 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 E9PSI1 815 aa16.05■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 IL2RBP14784 551 aa16.05■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 C5P01031 1676 aa16.03■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 DOT1LQ8TEK3 1739 aa16.02■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.16
CACNA1C-IT3-201ENST00000542680 PDE4DIPQ5VU43 2346 aa16.02■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 KCPQ6ZWJ8 1503 aa16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms