RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 HSP90B2PQ58FF3 399 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 SIRT1Q96EB6 747 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 NOS1P29475 1434 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 PAXBP1Q9Y5B6 917 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 RNF17Q9BXT8 1623 aaKnown RBP7.44□□□□□ -1.22
LMO3-225ENST00000541295 HTATSF1O43719 755 aaKnown RBP7.44□□□□□ -1.22
LMO3-225ENST00000541295 MKRN3Q13064 507 aaKnown RBP7.44□□□□□ -1.22
LMO3-225ENST00000541295 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 SMC5Q8IY18 1101 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 PUF60Q9UHX1 559 aaKnown RBP7.44□□□□□ -1.22
LMO3-225ENST00000541295 IPO5O00410 1097 aaKnown RBP7.44□□□□□ -1.22
LMO3-225ENST00000541295 HMMRO75330 724 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 FLT3P36888 993 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 CD151P48509 253 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 TMF1P82094 1093 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 ICE2Q659A1 982 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 AMOTL1Q8IY63 956 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 UPF2Q9HAU5 1272 aaKnown RBP7.44□□□□□ -1.22
LMO3-225ENST00000541295 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 KAT6BQ8WYB5 2073 aa7.44□□□□□ -1.22
LMO3-225ENST00000541295 DISP3Q9P2K9 1392 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 CCDC175P0C221 793 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 FAM200BP0CF97 657 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 TMEM132EQ6IEE7 984 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 ZNF662Q6ZS27 426 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 CAPN2P17655 700 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 IDI1Q13907 227 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 CCDC91Q7Z6B0 441 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 RMI1Q9H9A7 625 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 TRAK1Q9UPV9 953 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 KIF1BO60333 1816 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 COL17A1Q9UMD9 1497 aaPredicted RBP7.43□□□□□ -1.22
LMO3-225ENST00000541295 NAT1P18440 290 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 KLHL42Q9P2K6 505 aa7.43□□□□□ -1.22
LMO3-225ENST00000541295 KIF5CO60282 957 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 TRDNQ13061 729 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 IRF5Q13568 498 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 SAFB2Q14151 953 aaKnown RBP eCLIP7.42□□□□□ -1.22
LMO3-225ENST00000541295 C16orf87Q6PH81 154 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 PDILTQ8N807 584 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 KLHL23Q8NBE8 558 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 LARP6Q9BRS8 491 aaKnown RBP7.42□□□□□ -1.22
LMO3-225ENST00000541295 C22orf23Q9BZE7 217 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 MAF1Q9H063 256 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 SUFUQ9UMX1 484 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 MADDQ8WXG6 1647 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 ARPC5LQ9BPX5 153 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 JADE2Q9NQC1 790 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 CAMSAP1Q5T5Y3 1602 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 MROH2AA6NES4 1674 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 GPRASP1Q5JY77 1395 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 KIF13AQ9H1H9 1805 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 RIPK4P57078 832 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
LMO3-225ENST00000541295 CWC15Q9P013 229 aaKnown RBP7.42□□□□□ -1.22
LMO3-225ENST00000541295 LMTK2Q8IWU2 1503 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 SYNRGQ9UMZ2 1314 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 FAM184AQ8NB25 1140 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 TESK2Q96S53 571 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 DEF6Q9H4E7 631 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 OFD1O75665 1012 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 GUCY2CP25092 1073 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 CBX1P83916 185 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 PPP2R5AQ15172 486 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 AMOTL2Q9Y2J4 779 aa7.41□□□□□ -1.22
LMO3-225ENST00000541295 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
LMO3-225ENST00000541295 PANK3Q9H999 370 aa7.4□□□□□ -1.22
LMO3-225ENST00000541295 IRAK4Q9NWZ3 460 aa7.4□□□□□ -1.22
LMO3-225ENST00000541295 CWC25Q9NXE8 425 aaPredicted RBP7.4□□□□□ -1.22
LMO3-225ENST00000541295 FBXO9Q9UK97 447 aaPredicted RBP7.4□□□□□ -1.22
LMO3-225ENST00000541295 POLR1AO95602 1720 aaPredicted RBP7.4□□□□□ -1.22
LMO3-225ENST00000541295 CCDC196A0A1B0GTZ2 297 aa7.4□□□□□ -1.22
LMO3-225ENST00000541295 TAX1BP1Q86VP1 789 aa7.4□□□□□ -1.22
LMO3-225ENST00000541295 EIF3AQ14152 1382 aaKnown RBP7.4□□□□□ -1.22
LMO3-225ENST00000541295 UQCRHLA0A096LP55 91 aa7.4□□□□□ -1.23
LMO3-225ENST00000541295 UQCRHP07919 91 aa7.4□□□□□ -1.23
LMO3-225ENST00000541295 NBPF7P0C2Y1 421 aaPredicted RBP7.4□□□□□ -1.23
LMO3-225ENST00000541295 MSNP26038 577 aaKnown RBP7.4□□□□□ -1.23
LMO3-225ENST00000541295 APLP1P51693 650 aa7.4□□□□□ -1.23
LMO3-225ENST00000541295 CXorf56Q9H5V9 222 aa7.4□□□□□ -1.23
LMO3-225ENST00000541295 CIZ1Q9ULV3 898 aaPredicted RBP7.4□□□□□ -1.23
LMO3-225ENST00000541295 ZMYM4Q5VZL5 1548 aa7.4□□□□□ -1.23
LMO3-225ENST00000541295 RBM5P52756 815 aaKnown RBP eCLIP7.39□□□□□ -1.23
LMO3-225ENST00000541295 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
LMO3-225ENST00000541295 SWT1Q5T5J6 900 aaKnown RBP7.39□□□□□ -1.23
LMO3-225ENST00000541295 NUTM2GQ5VZR2 741 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 TTC30BQ8N4P2 665 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 PMM1Q92871 262 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 SCAF11Q99590 1463 aaKnown RBP7.39□□□□□ -1.23
LMO3-225ENST00000541295 SIGLEC1Q9BZZ2 1709 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 TULP2O00295 520 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 CBFA2T2O43439 604 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 U2AF1L5P0DN76 240 aaPredicted RBP7.39□□□□□ -1.23
LMO3-225ENST00000541295 U2AF1Q01081 240 aaKnown RBP eCLIP7.39□□□□□ -1.23
LMO3-225ENST00000541295 JAKMIP3Q5VZ66 844 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 MAMSTRQ6ZN01 415 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 RSPH14Q9UHP6 348 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 PDZRN3Q9UPQ7 1066 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms