RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
ATL3-204ENST00000540699 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
ATL3-204ENST00000540699 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
ATL3-204ENST00000540699 TXNRD1Q16881 649 aa13.97□□□□□ -0.17
ATL3-204ENST00000540699 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
ATL3-204ENST00000540699 ZNF831Q5JPB2 1677 aa13.96□□□□□ -0.17
ATL3-204ENST00000540699 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.18
ATL3-204ENST00000540699 GNAT3A8MTJ3 354 aa13.95□□□□□ -0.18
ATL3-204ENST00000540699 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
ATL3-204ENST00000540699 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
ATL3-204ENST00000540699 HTATSF1O43719 755 aaKnown RBP13.94□□□□□ -0.18
ATL3-204ENST00000540699 NEFMP07197 916 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 QSER1Q2KHR3 1735 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 PIGBQ92521 554 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 RUNDC1Q96C34 613 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 STK32BQ9NY57 414 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
ATL3-204ENST00000540699 CICQ96RK0 1608 aaPredicted RBP13.93□□□□□ -0.18
ATL3-204ENST00000540699 MAPK8IP3Q9UPT6 1336 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 TUBGCP6Q96RT7 1819 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 ZBTB7AO95365 584 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 SYTL4Q96C24 671 aaPredicted RBP13.93□□□□□ -0.18
ATL3-204ENST00000540699 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
ATL3-204ENST00000540699 PTGER2P43116 358 aa13.92□□□□□ -0.18
ATL3-204ENST00000540699 ZNF521Q96K83 1311 aa13.91□□□□□ -0.18
ATL3-204ENST00000540699 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
ATL3-204ENST00000540699 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
ATL3-204ENST00000540699 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
ATL3-204ENST00000540699 SENP3-EIF4A1A0A087X0R7 540 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 CABP4P57796 275 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 C5P01031 1676 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
ATL3-204ENST00000540699 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
ATL3-204ENST00000540699 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
ATL3-204ENST00000540699 APAF1O14727 1248 aa13.89□□□□□ -0.19
ATL3-204ENST00000540699 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
ATL3-204ENST00000540699 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
ATL3-204ENST00000540699 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
ATL3-204ENST00000540699 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
ATL3-204ENST00000540699 COL5A3P25940 1745 aaPredicted RBP13.89□□□□□ -0.19
ATL3-204ENST00000540699 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
ATL3-204ENST00000540699 RTF1Q92541 710 aaKnown RBP13.88□□□□□ -0.19
ATL3-204ENST00000540699 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
ATL3-204ENST00000540699 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
ATL3-204ENST00000540699 ASAP1Q9ULH1 1129 aa13.88□□□□□ -0.19
ATL3-204ENST00000540699 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
ATL3-204ENST00000540699 CHD4Q14839 1912 aa13.88□□□□□ -0.19
ATL3-204ENST00000540699 TJP1Q07157 1748 aa13.87□□□□□ -0.19
ATL3-204ENST00000540699 RIPK4P57078 832 aa13.87□□□□□ -0.19
ATL3-204ENST00000540699 TEFQ10587 303 aa13.87□□□□□ -0.19
ATL3-204ENST00000540699 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
ATL3-204ENST00000540699 MCM10Q7L590 875 aa13.87□□□□□ -0.19
ATL3-204ENST00000540699 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
ATL3-204ENST00000540699 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
ATL3-204ENST00000540699 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
ATL3-204ENST00000540699 DCTN1Q14203 1278 aa13.86□□□□□ -0.19
ATL3-204ENST00000540699 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
ATL3-204ENST00000540699 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
ATL3-204ENST00000540699 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
ATL3-204ENST00000540699 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
ATL3-204ENST00000540699 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
ATL3-204ENST00000540699 MYH14Q7Z406 1995 aaKnown RBP13.84□□□□□ -0.19
ATL3-204ENST00000540699 LOC102724428A0A0B4J2F2 783 aa13.84□□□□□ -0.19
ATL3-204ENST00000540699 SIK1P57059 783 aa13.84□□□□□ -0.19
ATL3-204ENST00000540699 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
ATL3-204ENST00000540699 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
ATL3-204ENST00000540699 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
ATL3-204ENST00000540699 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
ATL3-204ENST00000540699 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
ATL3-204ENST00000540699 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
ATL3-204ENST00000540699 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
ATL3-204ENST00000540699 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
ATL3-204ENST00000540699 SLC39A6Q13433 755 aa13.82□□□□□ -0.2
ATL3-204ENST00000540699 NEUROD2Q15784 382 aa13.82□□□□□ -0.2
ATL3-204ENST00000540699 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
ATL3-204ENST00000540699 CDCA7LQ96GN5 454 aa13.82□□□□□ -0.2
ATL3-204ENST00000540699 THUMPD2Q9BTF0 503 aaKnown RBP13.82□□□□□ -0.2
ATL3-204ENST00000540699 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
ATL3-204ENST00000540699 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
ATL3-204ENST00000540699 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
ATL3-204ENST00000540699 ITPK1Q13572 414 aa13.81□□□□□ -0.2
ATL3-204ENST00000540699 WWC1Q8IX03 1113 aa13.81□□□□□ -0.2
ATL3-204ENST00000540699 ARXQ96QS3 562 aa13.81□□□□□ -0.2
ATL3-204ENST00000540699 KCNQ4P56696 695 aa13.8□□□□□ -0.2
ATL3-204ENST00000540699 C1QTNF8P60827 252 aa13.8□□□□□ -0.2
ATL3-204ENST00000540699 TRMT2AQ8IZ69 625 aaKnown RBP13.8□□□□□ -0.2
ATL3-204ENST00000540699 VSIG10Q8N0Z9 540 aa13.8□□□□□ -0.2
ATL3-204ENST00000540699 PNPLA7Q6ZV29 1317 aa13.8□□□□□ -0.2
ATL3-204ENST00000540699 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
ATL3-204ENST00000540699 KCNQ3O43525 872 aa13.79□□□□□ -0.2
ATL3-204ENST00000540699 PTCD1O75127 700 aaKnown RBP13.79□□□□□ -0.2
ATL3-204ENST00000540699 ATP6V1AP38606 617 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms