RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MRE11P49959 708 aa16.78■□□□□ 0.28
BNIP3-202ENST00000540159 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
BNIP3-202ENST00000540159 GNAT3A8MTJ3 354 aa16.77■□□□□ 0.28
BNIP3-202ENST00000540159 KCNQ3O43525 872 aa16.77■□□□□ 0.28
BNIP3-202ENST00000540159 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
BNIP3-202ENST00000540159 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.27
BNIP3-202ENST00000540159 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.27
BNIP3-202ENST00000540159 FLT4P35916 1363 aa16.77■□□□□ 0.27
BNIP3-202ENST00000540159 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
BNIP3-202ENST00000540159 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
BNIP3-202ENST00000540159 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
BNIP3-202ENST00000540159 HOXC9P31274 260 aa16.76■□□□□ 0.27
BNIP3-202ENST00000540159 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
BNIP3-202ENST00000540159 ERC2O15083 957 aa16.76■□□□□ 0.27
BNIP3-202ENST00000540159 IL25Q9H293 177 aa16.76■□□□□ 0.27
BNIP3-202ENST00000540159 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
BNIP3-202ENST00000540159 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
BNIP3-202ENST00000540159 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
BNIP3-202ENST00000540159 ST18O60284 1047 aa16.75■□□□□ 0.27
BNIP3-202ENST00000540159 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
BNIP3-202ENST00000540159 MX1P20591 662 aa16.74■□□□□ 0.27
BNIP3-202ENST00000540159 TECPR2O15040 1411 aa16.74■□□□□ 0.27
BNIP3-202ENST00000540159 KIAA0232Q92628 1395 aa16.74■□□□□ 0.27
BNIP3-202ENST00000540159 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
BNIP3-202ENST00000540159 TRIM44Q96DX7 344 aaPredicted RBP16.74■□□□□ 0.27
BNIP3-202ENST00000540159 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
BNIP3-202ENST00000540159 REC8O95072 547 aa16.73■□□□□ 0.27
BNIP3-202ENST00000540159 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
BNIP3-202ENST00000540159 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
BNIP3-202ENST00000540159 GDPD2Q9HCC8 539 aa16.73■□□□□ 0.27
BNIP3-202ENST00000540159 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
BNIP3-202ENST00000540159 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
BNIP3-202ENST00000540159 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
BNIP3-202ENST00000540159 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
BNIP3-202ENST00000540159 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
BNIP3-202ENST00000540159 IGSF1Q8N6C5 1336 aa16.72■□□□□ 0.27
BNIP3-202ENST00000540159 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
BNIP3-202ENST00000540159 USP44Q9H0E7 712 aa16.71■□□□□ 0.27
BNIP3-202ENST00000540159 NSFL1CQ9UNZ2 370 aaKnown RBP16.71■□□□□ 0.27
BNIP3-202ENST00000540159 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
BNIP3-202ENST00000540159 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.26
BNIP3-202ENST00000540159 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 ARHGEF10O15013 1369 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
BNIP3-202ENST00000540159 TMX3Q96JJ7 454 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
BNIP3-202ENST00000540159 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
BNIP3-202ENST00000540159 UBR1Q8IWV7 1749 aa16.69■□□□□ 0.26
BNIP3-202ENST00000540159 PI4KAP2A4QPH2 592 aa16.69■□□□□ 0.26
BNIP3-202ENST00000540159 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
BNIP3-202ENST00000540159 OS9Q13438 667 aaPredicted RBP16.69■□□□□ 0.26
BNIP3-202ENST00000540159 PI4KAP1Q8N8J0 262 aa16.69■□□□□ 0.26
BNIP3-202ENST00000540159 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
BNIP3-202ENST00000540159 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
BNIP3-202ENST00000540159 CPA1P15085 419 aa16.68■□□□□ 0.26
BNIP3-202ENST00000540159 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
BNIP3-202ENST00000540159 GNAI3P08754 354 aa16.68■□□□□ 0.26
BNIP3-202ENST00000540159 MPNDQ8N594 471 aa16.68■□□□□ 0.26
BNIP3-202ENST00000540159 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
BNIP3-202ENST00000540159 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
BNIP3-202ENST00000540159 KIF24Q5T7B8 1368 aa16.67■□□□□ 0.26
BNIP3-202ENST00000540159 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
BNIP3-202ENST00000540159 CHMLP26374 656 aa16.67■□□□□ 0.26
BNIP3-202ENST00000540159 SKOR2Q2VWA4 1001 aaPredicted RBP16.67■□□□□ 0.26
BNIP3-202ENST00000540159 LMBRD1Q9NUN5 540 aa16.67■□□□□ 0.26
BNIP3-202ENST00000540159 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
BNIP3-202ENST00000540159 ESPNB1AK53 854 aa16.66■□□□□ 0.26
BNIP3-202ENST00000540159 PSME1Q06323 249 aa16.66■□□□□ 0.26
BNIP3-202ENST00000540159 NUCB2P80303 420 aa16.66■□□□□ 0.26
BNIP3-202ENST00000540159 GPT2Q8TD30 523 aa16.66■□□□□ 0.26
BNIP3-202ENST00000540159 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
BNIP3-202ENST00000540159 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
BNIP3-202ENST00000540159 PA2G4Q9UQ80 394 aaKnown RBP16.66■□□□□ 0.26
BNIP3-202ENST00000540159 REREQ9P2R6 1566 aa16.66■□□□□ 0.26
BNIP3-202ENST00000540159 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 SYCE3A1L190 88 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 THEMISQ8N1K5 641 aaPredicted RBP16.65■□□□□ 0.26
BNIP3-202ENST00000540159 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
BNIP3-202ENST00000540159 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
BNIP3-202ENST00000540159 TEFQ10587 303 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 TBX22Q9Y458 520 aa16.65■□□□□ 0.26
BNIP3-202ENST00000540159 KDRP35968 1356 aa16.64■□□□□ 0.26
BNIP3-202ENST00000540159 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.25
BNIP3-202ENST00000540159 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
BNIP3-202ENST00000540159 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
BNIP3-202ENST00000540159 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
BNIP3-202ENST00000540159 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
BNIP3-202ENST00000540159 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
BNIP3-202ENST00000540159 CWF19L2Q2TBE0 894 aaKnown RBP16.64■□□□□ 0.25
BNIP3-202ENST00000540159 RBSNQ9H1K0 784 aa16.63■□□□□ 0.25
BNIP3-202ENST00000540159 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
BNIP3-202ENST00000540159 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms