RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 NHSL1Q5SYE7 1610 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 ANKRD36BQ8N2N9 1353 aa9.92□□□□□ -0.82
NECAP1-204ENST00000540083 SPATA31A6Q5VVP1 1343 aa9.92□□□□□ -0.82
NECAP1-204ENST00000540083 GOLGA8CPA6NN73 597 aa9.92□□□□□ -0.82
NECAP1-204ENST00000540083 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
NECAP1-204ENST00000540083 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
NECAP1-204ENST00000540083 PODXL2Q9NZ53 605 aa9.92□□□□□ -0.82
NECAP1-204ENST00000540083 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
NECAP1-204ENST00000540083 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-204ENST00000540083 KTN1Q86UP2 1357 aaKnown RBP9.91□□□□□ -0.82
NECAP1-204ENST00000540083 DISP3Q9P2K9 1392 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 SMYD5Q6GMV2 418 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 LAPTM4BQ86VI4 370 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 NLRP13Q86W25 1043 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 SLC12A5Q9H2X9 1139 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 USP32Q8NFA0 1604 aa9.91□□□□□ -0.82
NECAP1-204ENST00000540083 TOPAZ1Q8N9V7 1692 aa9.9□□□□□ -0.82
NECAP1-204ENST00000540083 SPATA31A3Q5VYP0 1347 aa9.9□□□□□ -0.82
NECAP1-204ENST00000540083 ABTB2Q8N961 1025 aa9.9□□□□□ -0.82
NECAP1-204ENST00000540083 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
NECAP1-204ENST00000540083 HCSTQ9UBK5 93 aa9.9□□□□□ -0.82
NECAP1-204ENST00000540083 USP6P35125 1406 aa9.9□□□□□ -0.83
NECAP1-204ENST00000540083 CPSF1Q10570 1443 aaKnown RBP9.9□□□□□ -0.83
NECAP1-204ENST00000540083 TNS3Q68CZ2 1445 aa9.9□□□□□ -0.83
NECAP1-204ENST00000540083 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.83
NECAP1-204ENST00000540083 WNT2BQ93097 391 aa9.89□□□□□ -0.83
NECAP1-204ENST00000540083 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
NECAP1-204ENST00000540083 KIF7Q2M1P5 1343 aa9.88□□□□□ -0.83
NECAP1-204ENST00000540083 PXDNQ92626 1479 aa9.88□□□□□ -0.83
NECAP1-204ENST00000540083 KCNH5Q8NCM2 988 aa9.88□□□□□ -0.83
NECAP1-204ENST00000540083 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
NECAP1-204ENST00000540083 KNSTRNQ9Y448 316 aa9.88□□□□□ -0.83
NECAP1-204ENST00000540083 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
NECAP1-204ENST00000540083 CGNL1Q0VF96 1302 aa9.87□□□□□ -0.83
NECAP1-204ENST00000540083 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
NECAP1-204ENST00000540083 COL16A1Q07092 1604 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-204ENST00000540083 ANP32AP39687 249 aaKnown RBP9.87□□□□□ -0.83
NECAP1-204ENST00000540083 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-204ENST00000540083 DDX17Q92841 729 aaKnown RBP9.87□□□□□ -0.83
NECAP1-204ENST00000540083 IPO9Q96P70 1041 aaKnown RBP9.87□□□□□ -0.83
NECAP1-204ENST00000540083 SEPT9Q9UHD8 586 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-204ENST00000540083 A0A1W2PP64 1363 aa9.87□□□□□ -0.83
NECAP1-204ENST00000540083 PTGDRQ13258 359 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 FAM98CQ17RN3 349 aaKnown RBP9.86□□□□□ -0.83
NECAP1-204ENST00000540083 MEX3CQ5U5Q3 659 aaKnown RBP9.86□□□□□ -0.83
NECAP1-204ENST00000540083 TTC13Q8NBP0 860 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 COG3Q96JB2 828 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 PANK3Q9H999 370 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 SHPRHQ149N8 1683 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 PNPLA6Q8IY17 1366 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
NECAP1-204ENST00000540083 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-204ENST00000540083 THSD4Q6ZMP0 1018 aa9.85□□□□□ -0.83
NECAP1-204ENST00000540083 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
NECAP1-204ENST00000540083 IL27Q8NEV9 243 aa9.85□□□□□ -0.83
NECAP1-204ENST00000540083 ZFRQ96KR1 1074 aaKnown RBP9.85□□□□□ -0.83
NECAP1-204ENST00000540083 NSD2O96028 1365 aa9.85□□□□□ -0.83
NECAP1-204ENST00000540083 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
NECAP1-204ENST00000540083 RBM26Q5T8P6 1007 aaKnown RBP9.84□□□□□ -0.83
NECAP1-204ENST00000540083 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
NECAP1-204ENST00000540083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.83
NECAP1-204ENST00000540083 TATDN2Q93075 761 aa9.84□□□□□ -0.83
NECAP1-204ENST00000540083 MON2Q7Z3U7 1717 aa9.83□□□□□ -0.84
NECAP1-204ENST00000540083 C3orf80F5H4A9 247 aa9.83□□□□□ -0.84
NECAP1-204ENST00000540083 ANKK1Q8NFD2 765 aa9.83□□□□□ -0.84
NECAP1-204ENST00000540083 USP31Q70CQ4 1352 aa9.83□□□□□ -0.84
NECAP1-204ENST00000540083 CD163L1Q9NR16 1453 aa9.83□□□□□ -0.84
NECAP1-204ENST00000540083 COL22A1Q8NFW1 1626 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-204ENST00000540083 TRPM3Q9HCF6 1732 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-204ENST00000540083 NUTM2BA6NNL0 878 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-204ENST00000540083 NUTM2EB1AL46 878 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-204ENST00000540083 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
NECAP1-204ENST00000540083 SMAPO00193 183 aa9.82□□□□□ -0.84
NECAP1-204ENST00000540083 FCHSD2O94868 740 aa9.82□□□□□ -0.84
NECAP1-204ENST00000540083 GCP02774 474 aa9.82□□□□□ -0.84
NECAP1-204ENST00000540083 PTPN5P54829 565 aa9.82□□□□□ -0.84
NECAP1-204ENST00000540083 NUTM2AQ8IVF1 878 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-204ENST00000540083 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
NECAP1-204ENST00000540083 ALS2Q96Q42 1657 aa9.81□□□□□ -0.84
NECAP1-204ENST00000540083 FYB1O15117 783 aa9.81□□□□□ -0.84
NECAP1-204ENST00000540083 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
NECAP1-204ENST00000540083 PNMA3Q9UL41 463 aa9.81□□□□□ -0.84
NECAP1-204ENST00000540083 USP19O94966 1318 aa9.81□□□□□ -0.84
NECAP1-204ENST00000540083 MED1Q15648 1581 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-204ENST00000540083 NPC1L1Q9UHC9 1359 aa9.8□□□□□ -0.84
NECAP1-204ENST00000540083 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
NECAP1-204ENST00000540083 ZNF772Q68DY9 489 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-204ENST00000540083 NGLY1Q96IV0 654 aa9.8□□□□□ -0.84
NECAP1-204ENST00000540083 CARD14Q9BXL6 1004 aa9.8□□□□□ -0.84
NECAP1-204ENST00000540083 MYOM1P52179 1685 aa9.8□□□□□ -0.84
NECAP1-204ENST00000540083 RRP9O43818 475 aaKnown RBP9.79□□□□□ -0.84
NECAP1-204ENST00000540083 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
NECAP1-204ENST00000540083 NUTM2GQ5VZR2 741 aa9.79□□□□□ -0.84
NECAP1-204ENST00000540083 NME9Q86XW9 330 aa9.79□□□□□ -0.84
NECAP1-204ENST00000540083 PRDM11Q9NQV5 511 aa9.79□□□□□ -0.84
NECAP1-204ENST00000540083 NRKQ7Z2Y5 1582 aa9.79□□□□□ -0.84
NECAP1-204ENST00000540083 CPDO75976 1380 aa9.78□□□□□ -0.84
NECAP1-204ENST00000540083 KIF24Q5T7B8 1368 aa9.78□□□□□ -0.84
NECAP1-204ENST00000540083 BCAMP50895 628 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms