RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
MDH1-215ENST00000539945 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
MDH1-215ENST00000539945 RTL1A6NKG5 1358 aa12.6□□□□□ -0.39
MDH1-215ENST00000539945 RIPK4P57078 832 aa12.6□□□□□ -0.39
MDH1-215ENST00000539945 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
MDH1-215ENST00000539945 NFAT5O94916 1531 aa12.6□□□□□ -0.39
MDH1-215ENST00000539945 IL16Q14005 1332 aa12.6□□□□□ -0.39
MDH1-215ENST00000539945 NFE2L2Q16236 605 aa12.59□□□□□ -0.39
MDH1-215ENST00000539945 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
MDH1-215ENST00000539945 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
MDH1-215ENST00000539945 SLIT3O75094 1523 aa12.58□□□□□ -0.4
MDH1-215ENST00000539945 TK2O00142 265 aa12.58□□□□□ -0.4
MDH1-215ENST00000539945 HOXC9P31274 260 aa12.58□□□□□ -0.4
MDH1-215ENST00000539945 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
MDH1-215ENST00000539945 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
MDH1-215ENST00000539945 USP19O94966 1318 aa12.58□□□□□ -0.4
MDH1-215ENST00000539945 PHRF1Q9P1Y6 1649 aaKnown RBP12.57□□□□□ -0.4
MDH1-215ENST00000539945 SULT6B1Q6IMI4 303 aa12.57□□□□□ -0.4
MDH1-215ENST00000539945 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
MDH1-215ENST00000539945 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
MDH1-215ENST00000539945 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
MDH1-215ENST00000539945 LTN1O94822 1766 aa12.56□□□□□ -0.4
MDH1-215ENST00000539945 IP6K1Q92551 441 aa12.56□□□□□ -0.4
MDH1-215ENST00000539945 KDRP35968 1356 aa12.56□□□□□ -0.4
MDH1-215ENST00000539945 GCP02774 474 aa12.55□□□□□ -0.4
MDH1-215ENST00000539945 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
MDH1-215ENST00000539945 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
MDH1-215ENST00000539945 CALD1Q05682 793 aaKnown RBP12.54□□□□□ -0.4
MDH1-215ENST00000539945 LMOD3Q0VAK6 560 aa12.54□□□□□ -0.4
MDH1-215ENST00000539945 EYA1Q99502 592 aa12.54□□□□□ -0.4
MDH1-215ENST00000539945 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
MDH1-215ENST00000539945 PXDNQ92626 1479 aa12.54□□□□□ -0.4
MDH1-215ENST00000539945 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
MDH1-215ENST00000539945 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
MDH1-215ENST00000539945 ARHGEF25Q86VW2 580 aa12.54□□□□□ -0.4
MDH1-215ENST00000539945 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
MDH1-215ENST00000539945 BRINP3Q76B58 766 aa12.53□□□□□ -0.4
MDH1-215ENST00000539945 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
MDH1-215ENST00000539945 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
MDH1-215ENST00000539945 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
MDH1-215ENST00000539945 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
MDH1-215ENST00000539945 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
MDH1-215ENST00000539945 PLIN1O60240 522 aa12.51□□□□□ -0.41
MDH1-215ENST00000539945 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
MDH1-215ENST00000539945 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
MDH1-215ENST00000539945 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
MDH1-215ENST00000539945 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
MDH1-215ENST00000539945 SOS2Q07890 1332 aaPredicted RBP12.49□□□□□ -0.41
MDH1-215ENST00000539945 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
MDH1-215ENST00000539945 GNAI1P63096 354 aa12.49□□□□□ -0.41
MDH1-215ENST00000539945 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
MDH1-215ENST00000539945 BCAR3O75815 825 aa12.48□□□□□ -0.41
MDH1-215ENST00000539945 EXOSC9Q06265 439 aaKnown RBP12.48□□□□□ -0.41
MDH1-215ENST00000539945 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
MDH1-215ENST00000539945 MTHFSDQ2M296 383 aaKnown RBP12.47□□□□□ -0.41
MDH1-215ENST00000539945 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
MDH1-215ENST00000539945 EXOC6Q8TAG9 804 aa12.47□□□□□ -0.41
MDH1-215ENST00000539945 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
MDH1-215ENST00000539945 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
MDH1-215ENST00000539945 CRYBG1Q9Y4K1 1723 aa12.47□□□□□ -0.41
MDH1-215ENST00000539945 NCAPD2Q15021 1401 aa12.46□□□□□ -0.41
MDH1-215ENST00000539945 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
MDH1-215ENST00000539945 FAM83GA6ND36 823 aa12.46□□□□□ -0.41
MDH1-215ENST00000539945 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.41
MDH1-215ENST00000539945 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
MDH1-215ENST00000539945 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
MDH1-215ENST00000539945 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
MDH1-215ENST00000539945 ABCC6O95255 1503 aa12.46□□□□□ -0.41
MDH1-215ENST00000539945 HRO43593 1189 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 TBC1D12O60347 775 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 PDE3AQ14432 1141 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 CPDO75976 1380 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 NHSL1Q5SYE7 1610 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 LTBP4Q8N2S1 1624 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
MDH1-215ENST00000539945 ZC3H6P61129 1189 aaKnown RBP12.45□□□□□ -0.42
MDH1-215ENST00000539945 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 ANKRD24Q8TF21 1146 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
MDH1-215ENST00000539945 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
MDH1-215ENST00000539945 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
MDH1-215ENST00000539945 CAMTA1Q9Y6Y1 1673 aa12.44□□□□□ -0.42
MDH1-215ENST00000539945 CHL1O00533 1208 aa12.44□□□□□ -0.42
MDH1-215ENST00000539945 CCDC136Q96JN2 1154 aa12.44□□□□□ -0.42
MDH1-215ENST00000539945 COL18A1P39060 1754 aa12.44□□□□□ -0.42
MDH1-215ENST00000539945 CRB1P82279 1406 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 MCM10Q7L590 875 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 USHBP1Q8N6Y0 703 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 CABLES1Q8TDN4 633 aa12.43□□□□□ -0.42
MDH1-215ENST00000539945 RTF1Q92541 710 aaKnown RBP12.43□□□□□ -0.42
MDH1-215ENST00000539945 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
MDH1-215ENST00000539945 SSH1Q8WYL5 1049 aa12.42□□□□□ -0.42
MDH1-215ENST00000539945 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms