RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
TSPAN9-207ENST00000539631 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
TSPAN9-207ENST00000539631 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
TSPAN9-207ENST00000539631 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
TSPAN9-207ENST00000539631 MCM10Q7L590 875 aa16.79■□□□□ 0.28
TSPAN9-207ENST00000539631 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
TSPAN9-207ENST00000539631 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 RIPK4P57078 832 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 PROM2Q8N271 834 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 SRCAPQ6ZRS2 3230 aa16.78■□□□□ 0.28
TSPAN9-207ENST00000539631 APAF1O14727 1248 aa16.77■□□□□ 0.28
TSPAN9-207ENST00000539631 TEFQ10587 303 aa16.77■□□□□ 0.28
TSPAN9-207ENST00000539631 PALLDQ8WX93 1383 aa16.77■□□□□ 0.27
TSPAN9-207ENST00000539631 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
TSPAN9-207ENST00000539631 SMARCC1Q92922 1105 aaPredicted RBP16.76■□□□□ 0.27
TSPAN9-207ENST00000539631 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
TSPAN9-207ENST00000539631 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
TSPAN9-207ENST00000539631 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
TSPAN9-207ENST00000539631 KCNQ4P56696 695 aa16.74■□□□□ 0.27
TSPAN9-207ENST00000539631 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
TSPAN9-207ENST00000539631 LRRC4BQ9NT99 713 aa16.74■□□□□ 0.27
TSPAN9-207ENST00000539631 TRIM35Q9UPQ4 493 aa16.74■□□□□ 0.27
TSPAN9-207ENST00000539631 C5P01031 1676 aa16.73■□□□□ 0.27
TSPAN9-207ENST00000539631 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
TSPAN9-207ENST00000539631 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
TSPAN9-207ENST00000539631 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
TSPAN9-207ENST00000539631 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
TSPAN9-207ENST00000539631 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
TSPAN9-207ENST00000539631 LOC102724428A0A0B4J2F2 783 aa16.71■□□□□ 0.27
TSPAN9-207ENST00000539631 SIK1P57059 783 aa16.71■□□□□ 0.27
TSPAN9-207ENST00000539631 SLC27A3Q5K4L6 730 aa16.71■□□□□ 0.27
TSPAN9-207ENST00000539631 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
TSPAN9-207ENST00000539631 TJP1Q07157 1748 aa16.7■□□□□ 0.26
TSPAN9-207ENST00000539631 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
TSPAN9-207ENST00000539631 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
TSPAN9-207ENST00000539631 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
TSPAN9-207ENST00000539631 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
TSPAN9-207ENST00000539631 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
TSPAN9-207ENST00000539631 KCNQ3O43525 872 aa16.69■□□□□ 0.26
TSPAN9-207ENST00000539631 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
TSPAN9-207ENST00000539631 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
TSPAN9-207ENST00000539631 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
TSPAN9-207ENST00000539631 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
TSPAN9-207ENST00000539631 ITPK1Q13572 414 aa16.68■□□□□ 0.26
TSPAN9-207ENST00000539631 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
TSPAN9-207ENST00000539631 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
TSPAN9-207ENST00000539631 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
TSPAN9-207ENST00000539631 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
TSPAN9-207ENST00000539631 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
TSPAN9-207ENST00000539631 SALL2Q9Y467 1007 aaPredicted RBP16.67■□□□□ 0.26
TSPAN9-207ENST00000539631 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
TSPAN9-207ENST00000539631 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
TSPAN9-207ENST00000539631 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
TSPAN9-207ENST00000539631 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
TSPAN9-207ENST00000539631 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
TSPAN9-207ENST00000539631 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 CCDC27Q2M243 656 aa16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
TSPAN9-207ENST00000539631 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 MYH14Q7Z406 1995 aaKnown RBP16.63■□□□□ 0.25
TSPAN9-207ENST00000539631 VSIG10Q8N0Z9 540 aa16.62■□□□□ 0.25
TSPAN9-207ENST00000539631 CHL1O00533 1208 aa16.61■□□□□ 0.25
TSPAN9-207ENST00000539631 BABAM1Q9NWV8 329 aa16.61■□□□□ 0.25
TSPAN9-207ENST00000539631 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
TSPAN9-207ENST00000539631 CASZ1Q86V15 1759 aa16.6■□□□□ 0.25
TSPAN9-207ENST00000539631 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
TSPAN9-207ENST00000539631 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-207ENST00000539631 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-207ENST00000539631 CALD1Q05682 793 aaKnown RBP16.6■□□□□ 0.25
TSPAN9-207ENST00000539631 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
TSPAN9-207ENST00000539631 ZNF853P0CG23 659 aa16.59■□□□□ 0.25
TSPAN9-207ENST00000539631 AK7Q96M32 723 aa16.59■□□□□ 0.25
TSPAN9-207ENST00000539631 IFT57Q9NWB7 429 aa16.59■□□□□ 0.25
TSPAN9-207ENST00000539631 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
TSPAN9-207ENST00000539631 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 GNAI1P63096 354 aa16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 MBIPQ9NS73 344 aa16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 CNTNAP4Q9C0A0 1308 aa16.58■□□□□ 0.24
TSPAN9-207ENST00000539631 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
TSPAN9-207ENST00000539631 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
TSPAN9-207ENST00000539631 RC3H1Q5TC82 1133 aaKnown RBP16.57■□□□□ 0.24
TSPAN9-207ENST00000539631 WDR63Q8IWG1 891 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms