RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 OFD1O75665 1012 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 IGHDP01880 384 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 JMYQ8N9B5 988 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 RBM5P52756 815 aaKnown RBP eCLIP17.17■□□□□ 0.34
CACNB1-206ENST00000539338 FERMT3Q86UX7 667 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
CACNB1-206ENST00000539338 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 RFC4P35249 363 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 EPS15P42566 896 aa17.16■□□□□ 0.34
CACNB1-206ENST00000539338 FILIP1LQ4L180 1135 aa17.16■□□□□ 0.34
CACNB1-206ENST00000539338 DDX11Q96FC9 970 aa17.16■□□□□ 0.34
CACNB1-206ENST00000539338 NUP62CLQ9H1M0 184 aa17.16■□□□□ 0.34
CACNB1-206ENST00000539338 ACBD3Q9H3P7 528 aa17.16■□□□□ 0.34
CACNB1-206ENST00000539338 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 PLCH2O75038 1416 aa17.15■□□□□ 0.34
CACNB1-206ENST00000539338 SSFA2P28290 1259 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
CACNB1-206ENST00000539338 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
CACNB1-206ENST00000539338 TRIM22Q8IYM9 498 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 BICDL1Q6ZP65 573 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 RPGRQ92834 1020 aaKnown RBP17.14■□□□□ 0.33
CACNB1-206ENST00000539338 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
CACNB1-206ENST00000539338 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 ATP10AO60312 1499 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 TRPC5Q9UL62 973 aaPredicted RBP17.14■□□□□ 0.33
CACNB1-206ENST00000539338 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 CCDC69A6NI79 296 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 KCNA6P17658 529 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 IDI1Q13907 227 aa17.14■□□□□ 0.33
CACNB1-206ENST00000539338 TXLNAP40222 546 aa17.13■□□□□ 0.33
CACNB1-206ENST00000539338 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
CACNB1-206ENST00000539338 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
CACNB1-206ENST00000539338 UQCRHLA0A096LP55 91 aa17.13■□□□□ 0.33
CACNB1-206ENST00000539338 UQCRHP07919 91 aa17.13■□□□□ 0.33
CACNB1-206ENST00000539338 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
CACNB1-206ENST00000539338 CAMK4Q16566 473 aa17.13■□□□□ 0.33
CACNB1-206ENST00000539338 ST5P78524 1137 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 NF2P35240 595 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
CACNB1-206ENST00000539338 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 KRT32Q14532 448 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 FILIP1Q7Z7B0 1213 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 PTPRKQ15262 1439 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
CACNB1-206ENST00000539338 CCP110O43303 1012 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 FAM177A1Q8N128 213 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 CCDC112Q8NEF3 446 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 NOS1P29475 1434 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 BOLA2Q9H3K6 86 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 PARP3Q9Y6F1 533 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 A2MP01023 1474 aa17.11■□□□□ 0.33
CACNB1-206ENST00000539338 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-206ENST00000539338 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
CACNB1-206ENST00000539338 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
CACNB1-206ENST00000539338 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
CACNB1-206ENST00000539338 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 CTNNA3Q9UI47 895 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
CACNB1-206ENST00000539338 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
CACNB1-206ENST00000539338 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 ZSCAN30Q86W11 494 aa17.09■□□□□ 0.33
CACNB1-206ENST00000539338 IDH1O75874 414 aaKnown RBP17.09■□□□□ 0.33
CACNB1-206ENST00000539338 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.33
CACNB1-206ENST00000539338 FBLN1P23142 703 aa17.08■□□□□ 0.33
CACNB1-206ENST00000539338 TDO2P48775 406 aa17.08■□□□□ 0.32
CACNB1-206ENST00000539338 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
CACNB1-206ENST00000539338 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
CACNB1-206ENST00000539338 CCDC8Q9H0W5 538 aaPredicted RBP17.08■□□□□ 0.32
CACNB1-206ENST00000539338 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
CACNB1-206ENST00000539338 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
CACNB1-206ENST00000539338 MYD88Q99836 296 aa17.07■□□□□ 0.32
CACNB1-206ENST00000539338 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
CACNB1-206ENST00000539338 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
CACNB1-206ENST00000539338 CDKL5O76039 1030 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
CACNB1-206ENST00000539338 GRM1Q13255 1194 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 TSHZ3Q63HK5 1081 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 KRT18P05783 430 aaKnown RBP17.06■□□□□ 0.32
CACNB1-206ENST00000539338 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms