RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 CALCOCO1Q9P1Z2 691 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 CLIP2Q9UDT6 1046 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 ADGRL1O94910 1474 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 ERICH4A6NGS2 130 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 NOM1Q5C9Z4 860 aaKnown RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 CCAR2Q8N163 923 aaKnown RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 SCAND2PQ9GZW5 306 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 ZFYVE9O95405 1425 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 FYB1O15117 783 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 NPHP1O15259 732 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 EIF2S2P20042 333 aaKnown RBP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 DCTN1Q14203 1278 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 UTP14CQ5TAP6 766 aaKnown RBP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 CEP85Q6P2H3 762 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 CWC27Q6UX04 472 aaKnown RBP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 OGFRQ9NZT2 677 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 ATP10AO60312 1499 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 CDC42BPAQ5VT25 1732 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 IL1RAPL2Q9NP60 686 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 DDX19AQ9NUU7 478 aaKnown RBP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 IQGAP3Q86VI3 1631 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 RTEL1-TNFRSF6BF6WH68 1400 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 RAB11FIP3O75154 756 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 SMC2O95347 1197 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 DMTNQ08495 405 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 G3BP1Q13283 466 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 KRT222Q8N1A0 295 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 KIF18AQ8NI77 898 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 TSPYL1Q9H0U9 437 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 TRPM2O94759 1503 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 GSPT1P15170 499 aaKnown RBP8.11□□□□□ -1.11
SCAPER-203ENST00000538941 CLEC17AQ6ZS10 378 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 TSPYL6Q8N831 410 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 CCDC34Q96HJ3 373 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 SDF4Q9BRK5 362 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 SLC52A1Q9NWF4 448 aa8.11□□□□□ -1.11
SCAPER-203ENST00000538941 UNC13BO14795 1591 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 F13A1P00488 732 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 GJB2P29033 226 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 NUTM1Q86Y26 1132 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 ERC1Q8IUD2 1116 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 ZNF396Q96N95 335 aaPredicted RBP8.1□□□□□ -1.11
SCAPER-203ENST00000538941 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 PPIP5K1Q6PFW1 1433 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 PKP1Q13835 747 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 GORABQ5T7V8 394 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 C8orf58Q8NAV2 365 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 UHRF1BP1LA0JNW5 1464 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 SMTNL1A8MU46 457 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 BRD1O95696 1058 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
SCAPER-203ENST00000538941 CEP135Q66GS9 1140 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 CEP57L1Q8IYX8 460 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 MEIS3Q99687 375 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 FSD1Q9BTV5 496 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 CCDC171Q6TFL3 1326 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 NLRP1Q9C000 1473 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
SCAPER-203ENST00000538941 CAVIN2O95810 425 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 BLOC1S2Q6QNY1 142 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 FILIP1Q7Z7B0 1213 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 ABCA8O94911 1581 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 NGDNQ8NEJ9 315 aaKnown RBP8.09□□□□□ -1.11
SCAPER-203ENST00000538941 FAM177BA6PVY3 158 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 RIOK3O14730 519 aaKnown RBP8.09□□□□□ -1.11
SCAPER-203ENST00000538941 TSHZ3Q63HK5 1081 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 MCM10Q7L590 875 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 FERMT3Q86UX7 667 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 CKAP2LQ8IYA6 745 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 AK7Q96M32 723 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 PREX2Q70Z35 1606 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 ABCC4O15439 1325 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 NCOA3Q9Y6Q9 1424 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 KIF1BPQ96EK5 621 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 PDLIM2Q96JY6 352 aa8.09□□□□□ -1.11
SCAPER-203ENST00000538941 FOSBP53539 338 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 TIGD1Q96MW7 591 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 F6X3S4 739 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 SRGAP3O43295 1099 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 MLECQ14165 292 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
SCAPER-203ENST00000538941 PLPPR3Q6T4P5 718 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 LTV1Q96GA3 475 aaPredicted RBP8.08□□□□□ -1.12
SCAPER-203ENST00000538941 PHF23Q9BUL5 403 aaPredicted RBP8.08□□□□□ -1.12
SCAPER-203ENST00000538941 NUTM2FA1L443 756 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 CEBPZQ03701 1054 aaKnown RBP8.08□□□□□ -1.12
SCAPER-203ENST00000538941 STK3Q13188 491 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 TMCO3Q6UWJ1 677 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 OTUD7AQ8TE49 926 aaPredicted RBP8.08□□□□□ -1.12
SCAPER-203ENST00000538941 MYOM2P54296 1465 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 GLRX3O76003 335 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms