RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 CDC45O75419 566 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 C16orf71Q8IYS4 520 aaPredicted RBP14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 NECTIN2Q92692 538 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 CHMP4AQ9BY43 222 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 EIF5BO60841 1220 aaKnown RBP14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 HDGFL1Q5TGJ6 251 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 ANKRD24Q8TF21 1146 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 LMO7Q8WWI1 1683 aa14.19□□□□□ -0.14
SLC28A1-204ENST00000538177 PXDNLA1KZ92 1463 aa14.18□□□□□ -0.14
SLC28A1-204ENST00000538177 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
SLC28A1-204ENST00000538177 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
SLC28A1-204ENST00000538177 SNX21Q969T3 373 aa14.17□□□□□ -0.14
SLC28A1-204ENST00000538177 SLKQ9H2G2 1235 aaPredicted RBP14.17□□□□□ -0.14
SLC28A1-204ENST00000538177 AXIN2Q9Y2T1 843 aa14.17□□□□□ -0.14
SLC28A1-204ENST00000538177 OVOS2A0A0G2JMS6 1433 aa14.17□□□□□ -0.14
SLC28A1-204ENST00000538177 NCOA3Q9Y6Q9 1424 aa14.17□□□□□ -0.14
SLC28A1-204ENST00000538177 CAMTA1Q9Y6Y1 1673 aa14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 SMARCA5O60264 1052 aaPredicted RBP14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 TEFQ10587 303 aa14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 KDM3BQ7LBC6 1761 aa14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 KIF2CQ99661 725 aa14.16□□□□□ -0.14
SLC28A1-204ENST00000538177 N4BP2Q86UW6 1770 aaPredicted RBP14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 ATF3P18847 181 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 DCCP43146 1447 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 USP44Q9H0E7 712 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 OSBPL3Q9H4L5 887 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 PHAXQ9H814 394 aaKnown RBP14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 TMEM94Q12767 1356 aa14.15□□□□□ -0.14
SLC28A1-204ENST00000538177 BTBD11A6QL63 1104 aa14.15□□□□□ -0.15
SLC28A1-204ENST00000538177 KCNQ3O43525 872 aa14.15□□□□□ -0.15
SLC28A1-204ENST00000538177 HSCBQ8IWL3 235 aa14.15□□□□□ -0.15
SLC28A1-204ENST00000538177 ALS2Q96Q42 1657 aa14.15□□□□□ -0.15
SLC28A1-204ENST00000538177 PXDNQ92626 1479 aa14.14□□□□□ -0.15
SLC28A1-204ENST00000538177 LMTK3Q96Q04 1460 aa14.14□□□□□ -0.15
SLC28A1-204ENST00000538177 APBB1O00213 710 aa14.13□□□□□ -0.15
SLC28A1-204ENST00000538177 EIF2S2P20042 333 aaKnown RBP14.13□□□□□ -0.15
SLC28A1-204ENST00000538177 ERBB3P21860 1342 aa14.13□□□□□ -0.15
SLC28A1-204ENST00000538177 PNMA6EA0A0J9YXQ4 647 aa14.13□□□□□ -0.15
SLC28A1-204ENST00000538177 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
SLC28A1-204ENST00000538177 SDSP20132 328 aa14.13□□□□□ -0.15
SLC28A1-204ENST00000538177 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
SLC28A1-204ENST00000538177 LRRFIP2Q9Y608 721 aaKnown RBP14.12□□□□□ -0.15
SLC28A1-204ENST00000538177 UBTFL1P0CB47 393 aaPredicted RBP14.12□□□□□ -0.15
SLC28A1-204ENST00000538177 PDE1AP54750 535 aa14.12□□□□□ -0.15
SLC28A1-204ENST00000538177 CHPF2Q9P2E5 772 aa14.12□□□□□ -0.15
SLC28A1-204ENST00000538177 ZC3H6P61129 1189 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 GSE1Q14687 1217 aa14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 SRCIN1Q9C0H9 1055 aa14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 CHMP5Q9NZZ3 219 aa14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 SALL3Q9BXA9 1300 aa14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 IBTKQ9P2D0 1353 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-204ENST00000538177 LRRCC1Q9C099 1032 aa14.1□□□□□ -0.15
SLC28A1-204ENST00000538177 STRCP1A6NGW2 1772 aa14.1□□□□□ -0.15
SLC28A1-204ENST00000538177 BEND3Q5T5X7 828 aa14.1□□□□□ -0.15
SLC28A1-204ENST00000538177 CADPS2Q86UW7 1296 aa14.1□□□□□ -0.15
SLC28A1-204ENST00000538177 SSH3Q8TE77 659 aa14.1□□□□□ -0.15
SLC28A1-204ENST00000538177 DNAAF4Q8WXU2 420 aa14.1□□□□□ -0.15
SLC28A1-204ENST00000538177 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 DDIT3P35638 169 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 SPRYD3Q8NCJ5 442 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 USP26Q9BXU7 913 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 BCL11AQ9H165 835 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 DBF4Q9UBU7 674 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 ADAMTS7Q9UKP4 1686 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 PI4KAP2A4QPH2 592 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 CASC1Q6TDU7 716 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 PI4KAP1Q8N8J0 262 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
SLC28A1-204ENST00000538177 POLA2Q14181 598 aa14.08□□□□□ -0.16
SLC28A1-204ENST00000538177 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 DDX17Q92841 729 aaKnown RBP14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 STAP2Q9UGK3 403 aa14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 SIPA1L3O60292 1781 aaPredicted RBP14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 ADCY9O60503 1353 aa14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 PLEKHG2Q9H7P9 1386 aa14.07□□□□□ -0.16
SLC28A1-204ENST00000538177 COL18A1P39060 1754 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 ABCC6O95255 1503 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 ANXA1P04083 346 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 MX1P20591 662 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 RABEP1Q15276 862 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
SLC28A1-204ENST00000538177 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
SLC28A1-204ENST00000538177 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SLC28A1-204ENST00000538177 NBPF7P0C2Y1 421 aaPredicted RBP14.05□□□□□ -0.16
SLC28A1-204ENST00000538177 TATP17735 454 aaPredicted RBP14.05□□□□□ -0.16
SLC28A1-204ENST00000538177 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
SLC28A1-204ENST00000538177 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms