RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
SNHG1-206ENST00000537925 TUBGCP6Q96RT7 1819 aa15.19■□□□□ 0.02
SNHG1-206ENST00000537925 LGR6Q9HBX8 967 aa15.19■□□□□ 0.02
SNHG1-206ENST00000537925 QSER1Q2KHR3 1735 aa15.19■□□□□ 0.02
SNHG1-206ENST00000537925 GNAT3A8MTJ3 354 aa15.18■□□□□ 0.02
SNHG1-206ENST00000537925 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
SNHG1-206ENST00000537925 SLC27A3Q5K4L6 730 aa15.18■□□□□ 0.02
SNHG1-206ENST00000537925 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
SNHG1-206ENST00000537925 LRRC4BQ9NT99 713 aa15.18■□□□□ 0.02
SNHG1-206ENST00000537925 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
SNHG1-206ENST00000537925 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
SNHG1-206ENST00000537925 CABP4P57796 275 aa15.17■□□□□ 0.02
SNHG1-206ENST00000537925 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
SNHG1-206ENST00000537925 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
SNHG1-206ENST00000537925 NFATC2IPQ8NCF5 419 aa15.16■□□□□ 0.02
SNHG1-206ENST00000537925 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
SNHG1-206ENST00000537925 ASAP1Q9ULH1 1129 aa15.16■□□□□ 0.02
SNHG1-206ENST00000537925 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
SNHG1-206ENST00000537925 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
SNHG1-206ENST00000537925 NEFMP07197 916 aa15.15■□□□□ 0.02
SNHG1-206ENST00000537925 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNHG1-206ENST00000537925 NBPF14Q5TI25 921 aa15.15■□□□□ 0.02
SNHG1-206ENST00000537925 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
SNHG1-206ENST00000537925 ATG3Q9NT62 314 aa15.15■□□□□ 0.02
SNHG1-206ENST00000537925 CEMIPQ8WUJ3 1361 aa15.15■□□□□ 0.02
SNHG1-206ENST00000537925 YY1P25490 414 aa15.14■□□□□ 0.01
SNHG1-206ENST00000537925 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
SNHG1-206ENST00000537925 MRS2Q9HD23 443 aa15.14■□□□□ 0.01
SNHG1-206ENST00000537925 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
SNHG1-206ENST00000537925 CASZ1Q86V15 1759 aa15.14■□□□□ 0.01
SNHG1-206ENST00000537925 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
SNHG1-206ENST00000537925 HTATSF1O43719 755 aaKnown RBP15.14■□□□□ 0.01
SNHG1-206ENST00000537925 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
SNHG1-206ENST00000537925 UBR3Q6ZT12 1888 aa15.13■□□□□ 0.01
SNHG1-206ENST00000537925 C4BP0C0L5 1744 aa15.13■□□□□ 0.01
SNHG1-206ENST00000537925 TJP1Q07157 1748 aa15.13■□□□□ 0.01
SNHG1-206ENST00000537925 KCNQ4P56696 695 aa15.13■□□□□ 0.01
SNHG1-206ENST00000537925 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
SNHG1-206ENST00000537925 NFE2L2Q16236 605 aa15.13■□□□□ 0.01
SNHG1-206ENST00000537925 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
SNHG1-206ENST00000537925 PSDA5PKW4 1024 aaPredicted RBP15.12■□□□□ 0.01
SNHG1-206ENST00000537925 SIK1P57059 783 aa15.12■□□□□ 0.01
SNHG1-206ENST00000537925 MYH14Q7Z406 1995 aaKnown RBP15.11■□□□□ 0.01
SNHG1-206ENST00000537925 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
SNHG1-206ENST00000537925 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
SNHG1-206ENST00000537925 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
SNHG1-206ENST00000537925 KDM3BQ7LBC6 1761 aa15.11■□□□□ 0.01
SNHG1-206ENST00000537925 KCPQ6ZWJ8 1503 aa15.1■□□□□ 0.01
SNHG1-206ENST00000537925 TEFQ10587 303 aa15.1■□□□□ 0.01
SNHG1-206ENST00000537925 MCM10Q7L590 875 aa15.1■□□□□ 0.01
SNHG1-206ENST00000537925 CCDC146Q8IYE0 955 aa15.1■□□□□ 0.01
SNHG1-206ENST00000537925 PNISRQ8TF01 805 aaKnown RBP15.1■□□□□ 0.01
SNHG1-206ENST00000537925 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
SNHG1-206ENST00000537925 STK32BQ9NY57 414 aa15.1■□□□□ 0.01
SNHG1-206ENST00000537925 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
SNHG1-206ENST00000537925 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
SNHG1-206ENST00000537925 ZNF827Q17R98 1081 aa15.09■□□□□ 0.01
SNHG1-206ENST00000537925 SLC4A9Q96Q91 983 aa15.09■□□□□ 0.01
SNHG1-206ENST00000537925 DCTN1Q14203 1278 aa15.08■□□□□ 0.01
SNHG1-206ENST00000537925 ATP6V1AP38606 617 aa15.08■□□□□ 0
SNHG1-206ENST00000537925 SLC39A6Q13433 755 aa15.08■□□□□ 0
SNHG1-206ENST00000537925 ITPK1Q13572 414 aa15.08■□□□□ 0
SNHG1-206ENST00000537925 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
SNHG1-206ENST00000537925 PTCD1O75127 700 aaKnown RBP15.07■□□□□ 0
SNHG1-206ENST00000537925 RIPK4P57078 832 aa15.07■□□□□ 0
SNHG1-206ENST00000537925 COL24A1Q17RW2 1714 aa15.07■□□□□ 0
SNHG1-206ENST00000537925 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
SNHG1-206ENST00000537925 BTBD11A6QL63 1104 aa15.05■□□□□ -0
SNHG1-206ENST00000537925 ZNF790Q6PG37 636 aa15.05■□□□□ -0
SNHG1-206ENST00000537925 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
SNHG1-206ENST00000537925 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
SNHG1-206ENST00000537925 PDGFDQ9GZP0 370 aaPredicted RBP15.04■□□□□ -0
SNHG1-206ENST00000537925 RRP7AQ9Y3A4 280 aaKnown RBP15.04■□□□□ -0
SNHG1-206ENST00000537925 FAM9BQ8IZU0 186 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 TTC5Q8N0Z6 440 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
SNHG1-206ENST00000537925 TFCP2L1Q9NZI6 479 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 PNPLA7Q6ZV29 1317 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 C4AP0C0L4 1744 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 LAMB4A4D0S4 1761 aa15.03■□□□□ -0
SNHG1-206ENST00000537925 APAF1O14727 1248 aa15.02■□□□□ -0
SNHG1-206ENST00000537925 NEUROD2Q15784 382 aa15.02■□□□□ -0
SNHG1-206ENST00000537925 KCNQ3O43525 872 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 RC3H1Q5TC82 1133 aaKnown RBP15.01□□□□□ -0.01
SNHG1-206ENST00000537925 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-206ENST00000537925 AK7Q96M32 723 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 PPP4R2Q9NY27 417 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 CNTNAP4Q9C0A0 1308 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 HEG1Q9ULI3 1381 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
SNHG1-206ENST00000537925 AMIGO3Q86WK7 504 aa15□□□□□ -0.01
SNHG1-206ENST00000537925 CYP19A1P11511 503 aaPredicted RBP14.99□□□□□ -0.01
SNHG1-206ENST00000537925 SSFA2P28290 1259 aa14.99□□□□□ -0.01
SNHG1-206ENST00000537925 RNF123Q5XPI4 1314 aa14.99□□□□□ -0.01
SNHG1-206ENST00000537925 COL23A1Q86Y22 540 aaPredicted RBP14.99□□□□□ -0.01
SNHG1-206ENST00000537925 FLAD1Q8NFF5 587 aa14.99□□□□□ -0.01
SNHG1-206ENST00000537925 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms