RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 APAF1O14727 1248 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
PEX11B-203ENST00000537888 KCNQ4P56696 695 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
PEX11B-203ENST00000537888 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 SLFN5Q08AF3 891 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 CCDC146Q8IYE0 955 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
PEX11B-203ENST00000537888 ZNF530Q6P9A1 599 aaPredicted RBP16.77■□□□□ 0.27
PEX11B-203ENST00000537888 QSER1Q2KHR3 1735 aa16.76■□□□□ 0.27
PEX11B-203ENST00000537888 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
PEX11B-203ENST00000537888 TUBGCP6Q96RT7 1819 aa16.75■□□□□ 0.27
PEX11B-203ENST00000537888 HMOX1P09601 288 aa16.75■□□□□ 0.27
PEX11B-203ENST00000537888 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
PEX11B-203ENST00000537888 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
PEX11B-203ENST00000537888 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
PEX11B-203ENST00000537888 TMOD3Q9NYL9 352 aa16.74■□□□□ 0.27
PEX11B-203ENST00000537888 C5P01031 1676 aa16.74■□□□□ 0.27
PEX11B-203ENST00000537888 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
PEX11B-203ENST00000537888 E9PSI1 815 aa16.74■□□□□ 0.27
PEX11B-203ENST00000537888 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
PEX11B-203ENST00000537888 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
PEX11B-203ENST00000537888 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
PEX11B-203ENST00000537888 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
PEX11B-203ENST00000537888 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
PEX11B-203ENST00000537888 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
PEX11B-203ENST00000537888 PTGER2P43116 358 aa16.72■□□□□ 0.27
PEX11B-203ENST00000537888 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
PEX11B-203ENST00000537888 ZBTB7AO95365 584 aa16.71■□□□□ 0.27
PEX11B-203ENST00000537888 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
PEX11B-203ENST00000537888 ATG3Q9NT62 314 aa16.71■□□□□ 0.27
PEX11B-203ENST00000537888 SCN11AQ9UI33 1791 aa16.71■□□□□ 0.26
PEX11B-203ENST00000537888 MRC1P22897 1456 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 SGIP1Q9BQI5 828 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 SIK1P57059 783 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
PEX11B-203ENST00000537888 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 MTFR1LQ9H019 292 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 C4BP0C0L5 1744 aa16.7■□□□□ 0.26
PEX11B-203ENST00000537888 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
PEX11B-203ENST00000537888 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
PEX11B-203ENST00000537888 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
PEX11B-203ENST00000537888 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
PEX11B-203ENST00000537888 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
PEX11B-203ENST00000537888 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
PEX11B-203ENST00000537888 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
PEX11B-203ENST00000537888 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
PEX11B-203ENST00000537888 ITPK1Q13572 414 aa16.67■□□□□ 0.26
PEX11B-203ENST00000537888 SLC4A9Q96Q91 983 aa16.67■□□□□ 0.26
PEX11B-203ENST00000537888 CABP4P57796 275 aa16.67■□□□□ 0.26
PEX11B-203ENST00000537888 AMIGO3Q86WK7 504 aa16.67■□□□□ 0.26
PEX11B-203ENST00000537888 LINC00116Q8NCU8 138 aa16.67■□□□□ 0.26
PEX11B-203ENST00000537888 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
PEX11B-203ENST00000537888 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
PEX11B-203ENST00000537888 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
PEX11B-203ENST00000537888 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
PEX11B-203ENST00000537888 SLC16A10Q8TF71 515 aa16.66■□□□□ 0.26
PEX11B-203ENST00000537888 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
PEX11B-203ENST00000537888 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
PEX11B-203ENST00000537888 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
PEX11B-203ENST00000537888 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
PEX11B-203ENST00000537888 UTRNP46939 3433 aa16.64■□□□□ 0.25
PEX11B-203ENST00000537888 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
PEX11B-203ENST00000537888 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
PEX11B-203ENST00000537888 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
PEX11B-203ENST00000537888 CCDC136Q96JN2 1154 aa16.64■□□□□ 0.25
PEX11B-203ENST00000537888 VIRMAQ69YN4 1812 aaKnown RBP16.64■□□□□ 0.25
PEX11B-203ENST00000537888 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
PEX11B-203ENST00000537888 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
PEX11B-203ENST00000537888 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
PEX11B-203ENST00000537888 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
PEX11B-203ENST00000537888 COL5A3P25940 1745 aaPredicted RBP16.63■□□□□ 0.25
PEX11B-203ENST00000537888 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
PEX11B-203ENST00000537888 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
PEX11B-203ENST00000537888 EXOC6Q8TAG9 804 aa16.63■□□□□ 0.25
PEX11B-203ENST00000537888 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
PEX11B-203ENST00000537888 FCHSD2O94868 740 aa16.62■□□□□ 0.25
PEX11B-203ENST00000537888 PPP1R1BQ9UD71 204 aaPredicted RBP16.62■□□□□ 0.25
PEX11B-203ENST00000537888 AK7Q96M32 723 aa16.61■□□□□ 0.25
PEX11B-203ENST00000537888 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
PEX11B-203ENST00000537888 TJP1Q07157 1748 aa16.6■□□□□ 0.25
PEX11B-203ENST00000537888 KCPQ6ZWJ8 1503 aa16.6■□□□□ 0.25
PEX11B-203ENST00000537888 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
PEX11B-203ENST00000537888 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
PEX11B-203ENST00000537888 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
PEX11B-203ENST00000537888 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
PEX11B-203ENST00000537888 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
PEX11B-203ENST00000537888 IL16Q14005 1332 aa16.59■□□□□ 0.25
PEX11B-203ENST00000537888 CNTNAP4Q9C0A0 1308 aa16.59■□□□□ 0.25
PEX11B-203ENST00000537888 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
PEX11B-203ENST00000537888 SSFA2P28290 1259 aa16.59■□□□□ 0.25
PEX11B-203ENST00000537888 TMPOP42166 694 aaKnown RBP16.59■□□□□ 0.25
PEX11B-203ENST00000537888 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
PEX11B-203ENST00000537888 SIPA1L3O60292 1781 aaPredicted RBP16.59■□□□□ 0.25
PEX11B-203ENST00000537888 UBR2Q8IWV8 1755 aa16.58■□□□□ 0.24
PEX11B-203ENST00000537888 MAPK8IP3Q9UPT6 1336 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms