RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 KAT6BQ8WYB5 2073 aa31.66■■■□□ 2.66
HMGA2-208ENST00000537429 SYTL4Q96C24 671 aaPredicted RBP31.65■■■□□ 2.66
HMGA2-208ENST00000537429 SBF2Q86WG5 1849 aa31.65■■■□□ 2.66
HMGA2-208ENST00000537429 CFAP44Q96MT7 982 aa31.65■■■□□ 2.66
HMGA2-208ENST00000537429 ZNF853P0CG23 659 aa31.64■■■□□ 2.66
HMGA2-208ENST00000537429 SPINK5Q9NQ38 1064 aaPredicted RBP31.64■■■□□ 2.66
HMGA2-208ENST00000537429 IFT57Q9NWB7 429 aa31.64■■■□□ 2.66
HMGA2-208ENST00000537429 TMOD3Q9NYL9 352 aa31.64■■■□□ 2.66
HMGA2-208ENST00000537429 CHL1O00533 1208 aa31.62■■■□□ 2.65
HMGA2-208ENST00000537429 KCNQ2O43526 872 aa31.62■■■□□ 2.65
HMGA2-208ENST00000537429 GNAI1P63096 354 aa31.62■■■□□ 2.65
HMGA2-208ENST00000537429 PIGBQ92521 554 aa31.62■■■□□ 2.65
HMGA2-208ENST00000537429 NHSQ6T4R5 1651 aa31.62■■■□□ 2.65
HMGA2-208ENST00000537429 CDCA7LQ96GN5 454 aa31.61■■■□□ 2.65
HMGA2-208ENST00000537429 BABAM1Q9NWV8 329 aa31.61■■■□□ 2.65
HMGA2-208ENST00000537429 LAS1LQ9Y4W2 734 aaKnown RBP31.61■■■□□ 2.65
HMGA2-208ENST00000537429 BTBD11A6QL63 1104 aa31.59■■■□□ 2.65
HMGA2-208ENST00000537429 MIS18AQ9NYP9 233 aa31.59■■■□□ 2.65
HMGA2-208ENST00000537429 SLFN5Q08AF3 891 aa31.59■■■□□ 2.65
HMGA2-208ENST00000537429 E9PSI1 815 aa31.58■■■□□ 2.65
HMGA2-208ENST00000537429 TSPYL4Q9UJ04 414 aa31.57■■■□□ 2.64
HMGA2-208ENST00000537429 PTF1AQ7RTS3 328 aa31.56■■■□□ 2.64
HMGA2-208ENST00000537429 MBIPQ9NS73 344 aa31.56■■■□□ 2.64
HMGA2-208ENST00000537429 KDM3BQ7LBC6 1761 aa31.55■■■□□ 2.64
HMGA2-208ENST00000537429 TRMT2AQ8IZ69 625 aaKnown RBP31.55■■■□□ 2.64
HMGA2-208ENST00000537429 BCL11BQ9C0K0 894 aaPredicted RBP31.55■■■□□ 2.64
HMGA2-208ENST00000537429 MYH16Q9H6N6 1097 aa31.54■■■□□ 2.64
HMGA2-208ENST00000537429 PAPPAQ13219 1627 aa31.54■■■□□ 2.64
HMGA2-208ENST00000537429 TRIM37O94972 964 aa31.54■■■□□ 2.64
HMGA2-208ENST00000537429 SLC39A6Q13433 755 aa31.54■■■□□ 2.64
HMGA2-208ENST00000537429 ZNF790Q6PG37 636 aa31.54■■■□□ 2.64
HMGA2-208ENST00000537429 TSR2Q969E8 191 aaKnown RBP31.53■■■□□ 2.64
HMGA2-208ENST00000537429 ATG3Q9NT62 314 aa31.53■■■□□ 2.64
HMGA2-208ENST00000537429 FANCIQ9NVI1 1328 aa31.52■■■□□ 2.64
HMGA2-208ENST00000537429 KCNQ3O43525 872 aa31.52■■■□□ 2.64
HMGA2-208ENST00000537429 ASAP1Q9ULH1 1129 aa31.52■■■□□ 2.64
HMGA2-208ENST00000537429 BTAF1O14981 1849 aa31.51■■■□□ 2.64
HMGA2-208ENST00000537429 DUSP27Q5VZP5 1158 aa31.5■■■□□ 2.63
HMGA2-208ENST00000537429 TTC5Q8N0Z6 440 aa31.48■■■□□ 2.63
HMGA2-208ENST00000537429 UBR2Q8IWV8 1755 aa31.48■■■□□ 2.63
HMGA2-208ENST00000537429 EIF4A1P60842 406 aaKnown RBP31.46■■■□□ 2.63
HMGA2-208ENST00000537429 KCPQ6ZWJ8 1503 aa31.45■■■□□ 2.62
HMGA2-208ENST00000537429 SMARCC1Q92922 1105 aaPredicted RBP31.44■■■□□ 2.62
HMGA2-208ENST00000537429 ILDR2Q71H61 639 aa31.44■■■□□ 2.62
HMGA2-208ENST00000537429 ZNF496Q96IT1 587 aaPredicted RBP31.44■■■□□ 2.62
HMGA2-208ENST00000537429 HEG1Q9ULI3 1381 aa31.43■■■□□ 2.62
HMGA2-208ENST00000537429 PALLDQ8WX93 1383 aa31.42■■■□□ 2.62
HMGA2-208ENST00000537429 FMNL2Q96PY5 1086 aa31.42■■■□□ 2.62
HMGA2-208ENST00000537429 TNS1Q9HBL0 1735 aaKnown RBP31.42■■■□□ 2.62
HMGA2-208ENST00000537429 PTCD1O75127 700 aaKnown RBP31.41■■■□□ 2.62
HMGA2-208ENST00000537429 EXOSC9Q06265 439 aaKnown RBP31.41■■■□□ 2.62
HMGA2-208ENST00000537429 KRT24Q2M2I5 525 aa31.41■■■□□ 2.62
HMGA2-208ENST00000537429 APBA3O96018 575 aa31.39■■■□□ 2.62
HMGA2-208ENST00000537429 SF3B2Q13435 895 aaKnown RBP31.39■■■□□ 2.62
HMGA2-208ENST00000537429 C8orf58Q8NAV2 365 aa31.39■■■□□ 2.62
HMGA2-208ENST00000537429 GIGYF1O75420 1035 aaPredicted RBP31.37■■■□□ 2.61
HMGA2-208ENST00000537429 TSPYL6Q8N831 410 aa31.37■■■□□ 2.61
HMGA2-208ENST00000537429 RBM42Q9BTD8 480 aaKnown RBP31.37■■■□□ 2.61
HMGA2-208ENST00000537429 LY75O60449 1722 aa31.36■■■□□ 2.61
HMGA2-208ENST00000537429 VSIG10Q8N0Z9 540 aa31.36■■■□□ 2.61
HMGA2-208ENST00000537429 SLC4A9Q96Q91 983 aa31.36■■■□□ 2.61
HMGA2-208ENST00000537429 LOC102724428A0A0B4J2F2 783 aa31.35■■■□□ 2.61
HMGA2-208ENST00000537429 PLSCR1O15162 318 aa31.35■■■□□ 2.61
HMGA2-208ENST00000537429 SIK1P57059 783 aa31.35■■■□□ 2.61
HMGA2-208ENST00000537429 ELL2O00472 640 aaPredicted RBP31.34■■■□□ 2.61
HMGA2-208ENST00000537429 SNRPA1P09661 255 aaKnown RBP31.34■■■□□ 2.61
HMGA2-208ENST00000537429 TWISTNBQ3B726 338 aaPredicted RBP31.34■■■□□ 2.61
HMGA2-208ENST00000537429 ZNF831Q5JPB2 1677 aa31.33■■■□□ 2.61
HMGA2-208ENST00000537429 SOS1Q07889 1333 aaPredicted RBP31.33■■■□□ 2.61
HMGA2-208ENST00000537429 PRAMEF22A3QJZ6 481 aa31.32■■■□□ 2.6
HMGA2-208ENST00000537429 HOXB7P09629 217 aa31.32■■■□□ 2.6
HMGA2-208ENST00000537429 C5P01031 1676 aa31.31■■■□□ 2.6
HMGA2-208ENST00000537429 VAMP4O75379 141 aa31.31■■■□□ 2.6
HMGA2-208ENST00000537429 CCDC125Q86Z20 511 aa31.31■■■□□ 2.6
HMGA2-208ENST00000537429 CICQ96RK0 1608 aaPredicted RBP31.3■■■□□ 2.6
HMGA2-208ENST00000537429 ATP6V1AP38606 617 aa31.29■■■□□ 2.6
HMGA2-208ENST00000537429 CT47B1P0C2W7 299 aaPredicted RBP31.29■■■□□ 2.6
HMGA2-208ENST00000537429 USP16Q9Y5T5 823 aa31.29■■■□□ 2.6
HMGA2-208ENST00000537429 RGPD3A6NKT7 1758 aaPredicted RBP31.28■■■□□ 2.6
HMGA2-208ENST00000537429 RGPD4Q7Z3J3 1758 aa31.28■■■□□ 2.6
HMGA2-208ENST00000537429 TJP1Q07157 1748 aa31.28■■■□□ 2.6
HMGA2-208ENST00000537429 TEX13AQ9BXU3 409 aaPredicted RBP31.28■■■□□ 2.6
HMGA2-208ENST00000537429 BAG6P46379 1132 aa31.27■■■□□ 2.6
HMGA2-208ENST00000537429 DNAJC10Q8IXB1 793 aa31.27■■■□□ 2.6
HMGA2-208ENST00000537429 CCNL1Q9UK58 526 aaPredicted RBP31.27■■■□□ 2.6
HMGA2-208ENST00000537429 ITPK1Q13572 414 aa31.26■■■□□ 2.59
HMGA2-208ENST00000537429 PROM2Q8N271 834 aa31.26■■■□□ 2.59
HMGA2-208ENST00000537429 LAMB4A4D0S4 1761 aa31.26■■■□□ 2.59
HMGA2-208ENST00000537429 SLC27A3Q5K4L6 730 aa31.25■■■□□ 2.59
HMGA2-208ENST00000537429 UPF1Q92900 1129 aaKnown RBP eCLIP31.25■■■□□ 2.59
HMGA2-208ENST00000537429 KCNQ4P56696 695 aa31.24■■■□□ 2.59
HMGA2-208ENST00000537429 TXNRD1Q16881 649 aa31.24■■■□□ 2.59
HMGA2-208ENST00000537429 EN1Q05925 392 aaPredicted RBP31.24■■■□□ 2.59
HMGA2-208ENST00000537429 ZNF428Q96B54 188 aa31.24■■■□□ 2.59
HMGA2-208ENST00000537429 LRRC4BQ9NT99 713 aa31.24■■■□□ 2.59
HMGA2-208ENST00000537429 EIF2S2P20042 333 aaKnown RBP31.23■■■□□ 2.59
HMGA2-208ENST00000537429 HDGFL1Q5TGJ6 251 aa31.23■■■□□ 2.59
HMGA2-208ENST00000537429 CYP19A1P11511 503 aaPredicted RBP31.22■■■□□ 2.59
HMGA2-208ENST00000537429 DEFB132Q7Z7B7 95 aa31.22■■■□□ 2.59
HMGA2-208ENST00000537429 CAMKK2Q96RR4 588 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms