RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 MBIPQ9NS73 344 aa13.01□□□□□ -0.33
LMO3-215ENST00000537304 PAXBP1Q9Y5B6 917 aa13.01□□□□□ -0.33
LMO3-215ENST00000537304 SMTNL1A8MU46 457 aa13□□□□□ -0.33
LMO3-215ENST00000537304 PLEKHG5O94827 1062 aa13□□□□□ -0.33
LMO3-215ENST00000537304 IDI1Q13907 227 aa13□□□□□ -0.33
LMO3-215ENST00000537304 ATP2B3Q16720 1220 aa13□□□□□ -0.33
LMO3-215ENST00000537304 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
LMO3-215ENST00000537304 ZSCAN21Q9Y5A6 473 aaPredicted RBP13□□□□□ -0.33
LMO3-215ENST00000537304 CDK12Q9NYV4 1490 aaPredicted RBP13□□□□□ -0.33
LMO3-215ENST00000537304 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
LMO3-215ENST00000537304 AOX1Q06278 1338 aa12.99□□□□□ -0.33
LMO3-215ENST00000537304 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
LMO3-215ENST00000537304 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
LMO3-215ENST00000537304 ZNF771Q7L3S4 317 aaPredicted RBP12.99□□□□□ -0.33
LMO3-215ENST00000537304 NEXMIFQ5QGS0 1516 aa12.99□□□□□ -0.33
LMO3-215ENST00000537304 RIMS2Q9UQ26 1411 aa12.99□□□□□ -0.33
LMO3-215ENST00000537304 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
LMO3-215ENST00000537304 CCDC192P0DO97 292 aa12.99□□□□□ -0.33
LMO3-215ENST00000537304 ZSCAN22P10073 491 aaPredicted RBP12.98□□□□□ -0.33
LMO3-215ENST00000537304 PDE1AP54750 535 aa12.98□□□□□ -0.33
LMO3-215ENST00000537304 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.98□□□□□ -0.33
LMO3-215ENST00000537304 C16orf71Q8IYS4 520 aaPredicted RBP12.98□□□□□ -0.33
LMO3-215ENST00000537304 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
LMO3-215ENST00000537304 TMEM131LA2VDJ0 1609 aa12.98□□□□□ -0.33
LMO3-215ENST00000537304 ATP7BP35670 1465 aa12.98□□□□□ -0.33
LMO3-215ENST00000537304 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
LMO3-215ENST00000537304 AEBP1Q8IUX7 1158 aa12.97□□□□□ -0.33
LMO3-215ENST00000537304 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
LMO3-215ENST00000537304 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
LMO3-215ENST00000537304 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.33
LMO3-215ENST00000537304 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
LMO3-215ENST00000537304 SPATA31D1Q6ZQQ2 1576 aa12.96□□□□□ -0.33
LMO3-215ENST00000537304 CAVIN2O95810 425 aa12.96□□□□□ -0.34
LMO3-215ENST00000537304 CCT4P50991 539 aaKnown RBP12.96□□□□□ -0.34
LMO3-215ENST00000537304 RNF20Q5VTR2 975 aa12.96□□□□□ -0.34
LMO3-215ENST00000537304 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.34
LMO3-215ENST00000537304 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
LMO3-215ENST00000537304 GADD45BO75293 160 aaPredicted RBP12.95□□□□□ -0.34
LMO3-215ENST00000537304 FUCA2Q9BTY2 467 aa12.95□□□□□ -0.34
LMO3-215ENST00000537304 TSPYL1Q9H0U9 437 aa12.95□□□□□ -0.34
LMO3-215ENST00000537304 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
LMO3-215ENST00000537304 NEMFO60524 1076 aa12.94□□□□□ -0.34
LMO3-215ENST00000537304 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
LMO3-215ENST00000537304 FAM200AQ8TCP9 573 aa12.94□□□□□ -0.34
LMO3-215ENST00000537304 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
LMO3-215ENST00000537304 MORC2Q9Y6X9 1032 aaPredicted RBP12.94□□□□□ -0.34
LMO3-215ENST00000537304 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
LMO3-215ENST00000537304 PTPRMP28827 1452 aa12.94□□□□□ -0.34
LMO3-215ENST00000537304 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 STX6O43752 255 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 CDK11BP21127 795 aaKnown RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
LMO3-215ENST00000537304 CHMLP26374 656 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 MLECQ14165 292 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 CCDC112Q8NEF3 446 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 DDX41Q9UJV9 622 aaKnown RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 MSH6P52701 1360 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 YTHDC2Q9H6S0 1430 aaKnown RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 F13A1P00488 732 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 NCBP1Q09161 790 aaKnown RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 KRT222Q8N1A0 295 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 TSC1Q92574 1164 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
LMO3-215ENST00000537304 LRRCC1Q9C099 1032 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
LMO3-215ENST00000537304 HSPA4P34932 840 aa12.92□□□□□ -0.34
LMO3-215ENST00000537304 SLC20A2Q08357 652 aa12.92□□□□□ -0.34
LMO3-215ENST00000537304 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
LMO3-215ENST00000537304 CALCOCO1Q9P1Z2 691 aa12.92□□□□□ -0.34
LMO3-215ENST00000537304 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 KIF2AO00139 706 aaPredicted RBP12.91□□□□□ -0.34
LMO3-215ENST00000537304 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
LMO3-215ENST00000537304 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
LMO3-215ENST00000537304 GNAI2P04899 355 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 IL13P35225 146 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
LMO3-215ENST00000537304 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 KCNF1Q9H3M0 494 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 PYCARDQ9ULZ3 195 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 SALL3Q9BXA9 1300 aa12.91□□□□□ -0.34
LMO3-215ENST00000537304 GNAI3P08754 354 aa12.9□□□□□ -0.34
LMO3-215ENST00000537304 CDC25BP30305 580 aa12.9□□□□□ -0.34
LMO3-215ENST00000537304 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
LMO3-215ENST00000537304 SH2B1Q9NRF2 756 aaPredicted RBP12.9□□□□□ -0.34
LMO3-215ENST00000537304 CNPY2Q9Y2B0 182 aa12.9□□□□□ -0.34
LMO3-215ENST00000537304 EDC4Q6P2E9 1401 aaKnown RBP12.9□□□□□ -0.34
LMO3-215ENST00000537304 ELP1O95163 1332 aa12.9□□□□□ -0.34
LMO3-215ENST00000537304 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
LMO3-215ENST00000537304 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
LMO3-215ENST00000537304 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms