RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 SLC52A2Q9HAB3 445 aa29.52■■■□□ 2.32
VPS37C-202ENST00000535818 ADAMTS7Q9UKP4 1686 aa29.51■■■□□ 2.31
VPS37C-202ENST00000535818 MRC1P22897 1456 aa29.51■■■□□ 2.31
VPS37C-202ENST00000535818 PNNQ9H307 717 aaKnown RBP29.51■■■□□ 2.31
VPS37C-202ENST00000535818 AKT1S1Q96B36 256 aa29.5■■■□□ 2.31
VPS37C-202ENST00000535818 RBM42Q9BTD8 480 aaKnown RBP29.5■■■□□ 2.31
VPS37C-202ENST00000535818 TFCP2L1Q9NZI6 479 aa29.49■■■□□ 2.31
VPS37C-202ENST00000535818 MAPK8IP3Q9UPT6 1336 aa29.48■■■□□ 2.31
VPS37C-202ENST00000535818 TAF1LQ8IZX4 1826 aa29.48■■■□□ 2.31
VPS37C-202ENST00000535818 CASZ1Q86V15 1759 aa29.48■■■□□ 2.31
VPS37C-202ENST00000535818 LRP5O75197 1615 aa29.47■■■□□ 2.31
VPS37C-202ENST00000535818 ATP6V1AP38606 617 aa29.47■■■□□ 2.31
VPS37C-202ENST00000535818 TEFQ10587 303 aa29.47■■■□□ 2.31
VPS37C-202ENST00000535818 WDR43Q15061 677 aaKnown RBP eCLIP29.47■■■□□ 2.31
VPS37C-202ENST00000535818 ANP32CO43423 234 aa29.46■■■□□ 2.31
VPS37C-202ENST00000535818 RTF1Q92541 710 aaKnown RBP29.46■■■□□ 2.31
VPS37C-202ENST00000535818 IL17REQ8NFR9 667 aa29.44■■■□□ 2.3
VPS37C-202ENST00000535818 PLEKHF1Q96S99 279 aa29.44■■■□□ 2.3
VPS37C-202ENST00000535818 PDGFDQ9GZP0 370 aaPredicted RBP29.44■■■□□ 2.3
VPS37C-202ENST00000535818 C4BP0C0L5 1744 aa29.44■■■□□ 2.3
VPS37C-202ENST00000535818 QSER1Q2KHR3 1735 aa29.44■■■□□ 2.3
VPS37C-202ENST00000535818 TUBGCP6Q96RT7 1819 aa29.43■■■□□ 2.3
VPS37C-202ENST00000535818 PTCD1O75127 700 aaKnown RBP29.43■■■□□ 2.3
VPS37C-202ENST00000535818 AK7Q96M32 723 aa29.43■■■□□ 2.3
VPS37C-202ENST00000535818 ITPK1Q13572 414 aa29.41■■■□□ 2.3
VPS37C-202ENST00000535818 LINC00116Q8NCU8 138 aa29.41■■■□□ 2.3
VPS37C-202ENST00000535818 SPON1Q9HCB6 807 aa29.41■■■□□ 2.3
VPS37C-202ENST00000535818 ZNF831Q5JPB2 1677 aa29.4■■■□□ 2.3
VPS37C-202ENST00000535818 ZBTB7AO95365 584 aa29.4■■■□□ 2.3
VPS37C-202ENST00000535818 SLC39A6Q13433 755 aa29.4■■■□□ 2.3
VPS37C-202ENST00000535818 PNPLA7Q6ZV29 1317 aa29.4■■■□□ 2.3
VPS37C-202ENST00000535818 CEMIPQ8WUJ3 1361 aa29.39■■■□□ 2.3
VPS37C-202ENST00000535818 MSH5O43196 834 aa29.38■■■□□ 2.29
VPS37C-202ENST00000535818 HTATSF1O43719 755 aaKnown RBP29.38■■■□□ 2.29
VPS37C-202ENST00000535818 NFE2L2Q16236 605 aa29.38■■■□□ 2.29
VPS37C-202ENST00000535818 MCM10Q7L590 875 aa29.38■■■□□ 2.29
VPS37C-202ENST00000535818 TTC5Q8N0Z6 440 aa29.38■■■□□ 2.29
VPS37C-202ENST00000535818 SLC4A9Q96Q91 983 aa29.38■■■□□ 2.29
VPS37C-202ENST00000535818 SIPA1L3O60292 1781 aaPredicted RBP29.36■■■□□ 2.29
VPS37C-202ENST00000535818 DLG5Q8TDM6 1919 aa29.36■■■□□ 2.29
VPS37C-202ENST00000535818 DCTN1Q14203 1278 aa29.35■■■□□ 2.29
VPS37C-202ENST00000535818 MTFR1LQ9H019 292 aa29.35■■■□□ 2.29
VPS37C-202ENST00000535818 ATF5Q9Y2D1 282 aaPredicted RBP29.35■■■□□ 2.29
VPS37C-202ENST00000535818 CCDC146Q8IYE0 955 aa29.34■■■□□ 2.29
VPS37C-202ENST00000535818 FLAD1Q8NFF5 587 aa29.34■■■□□ 2.29
VPS37C-202ENST00000535818 ADAMTS8Q9UP79 889 aa29.34■■■□□ 2.29
VPS37C-202ENST00000535818 GNPATO15228 680 aa29.33■■■□□ 2.29
VPS37C-202ENST00000535818 PHF14O94880 888 aa29.33■■■□□ 2.29
VPS37C-202ENST00000535818 KCPQ6ZWJ8 1503 aa29.33■■■□□ 2.29
VPS37C-202ENST00000535818 COL5A3P25940 1745 aaPredicted RBP29.33■■■□□ 2.29
VPS37C-202ENST00000535818 TJP1Q07157 1748 aa29.32■■■□□ 2.28
VPS37C-202ENST00000535818 BTBD11A6QL63 1104 aa29.32■■■□□ 2.28
VPS37C-202ENST00000535818 SLC16A10Q8TF71 515 aa29.32■■■□□ 2.28
VPS37C-202ENST00000535818 PPP1R1BQ9UD71 204 aaPredicted RBP29.32■■■□□ 2.28
VPS37C-202ENST00000535818 UBR3Q6ZT12 1888 aa29.31■■■□□ 2.28
VPS37C-202ENST00000535818 COL23A1Q86Y22 540 aaPredicted RBP29.31■■■□□ 2.28
VPS37C-202ENST00000535818 RUNDC1Q96C34 613 aa29.31■■■□□ 2.28
VPS37C-202ENST00000535818 UBR2Q8IWV8 1755 aa29.31■■■□□ 2.28
VPS37C-202ENST00000535818 CICQ96RK0 1608 aaPredicted RBP29.31■■■□□ 2.28
VPS37C-202ENST00000535818 ZNF790Q6PG37 636 aa29.3■■■□□ 2.28
VPS37C-202ENST00000535818 CNTNAP4Q9C0A0 1308 aa29.29■■■□□ 2.28
VPS37C-202ENST00000535818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.28■■■□□ 2.28
VPS37C-202ENST00000535818 SSFA2P28290 1259 aa29.28■■■□□ 2.28
VPS37C-202ENST00000535818 RIPK4P57078 832 aa29.28■■■□□ 2.28
VPS37C-202ENST00000535818 RC3H1Q5TC82 1133 aaKnown RBP29.28■■■□□ 2.28
VPS37C-202ENST00000535818 TMPOP42166 694 aaKnown RBP29.27■■■□□ 2.28
VPS37C-202ENST00000535818 CCDC184Q52MB2 194 aa29.27■■■□□ 2.28
VPS37C-202ENST00000535818 DNAJC10Q8IXB1 793 aa29.27■■■□□ 2.28
VPS37C-202ENST00000535818 MRS2Q9HD23 443 aa29.27■■■□□ 2.28
VPS37C-202ENST00000535818 RTCBQ9Y3I0 505 aaKnown RBP29.27■■■□□ 2.28
VPS37C-202ENST00000535818 CRKLP46109 303 aaKnown RBP29.26■■■□□ 2.27
VPS37C-202ENST00000535818 SMIM5Q71RC9 77 aa29.26■■■□□ 2.27
VPS37C-202ENST00000535818 AMIGO3Q86WK7 504 aa29.26■■■□□ 2.27
VPS37C-202ENST00000535818 VSIG10Q8N0Z9 540 aa29.26■■■□□ 2.27
VPS37C-202ENST00000535818 LMOD3Q0VAK6 560 aa29.25■■■□□ 2.27
VPS37C-202ENST00000535818 NEUROD2Q15784 382 aa29.25■■■□□ 2.27
VPS37C-202ENST00000535818 ZNF496Q96IT1 587 aaPredicted RBP29.25■■■□□ 2.27
VPS37C-202ENST00000535818 FMNL2Q96PY5 1086 aa29.25■■■□□ 2.27
VPS37C-202ENST00000535818 RRP7AQ9Y3A4 280 aaKnown RBP29.25■■■□□ 2.27
VPS37C-202ENST00000535818 PTGER2P43116 358 aa29.24■■■□□ 2.27
VPS37C-202ENST00000535818 TAF7Q15545 349 aaPredicted RBP29.24■■■□□ 2.27
VPS37C-202ENST00000535818 THUMPD2Q9BTF0 503 aaKnown RBP29.24■■■□□ 2.27
VPS37C-202ENST00000535818 HEG1Q9ULI3 1381 aa29.23■■■□□ 2.27
VPS37C-202ENST00000535818 KCNQ3O43525 872 aa29.22■■■□□ 2.27
VPS37C-202ENST00000535818 POLD1P28340 1107 aa29.22■■■□□ 2.27
VPS37C-202ENST00000535818 RPS6KA4O75676 772 aa29.21■■■□□ 2.27
VPS37C-202ENST00000535818 PNISRQ8TF01 805 aaKnown RBP29.21■■■□□ 2.27
VPS37C-202ENST00000535818 MYH14Q7Z406 1995 aaKnown RBP29.21■■■□□ 2.27
VPS37C-202ENST00000535818 TRAPPC3LQ5T215 181 aa29.2■■■□□ 2.26
VPS37C-202ENST00000535818 MSL1Q68DK7 614 aa29.2■■■□□ 2.26
VPS37C-202ENST00000535818 CCDC87Q9NVE4 849 aa29.2■■■□□ 2.26
VPS37C-202ENST00000535818 SRCAPQ6ZRS2 3230 aa29.2■■■□□ 2.26
VPS37C-202ENST00000535818 CYP19A1P11511 503 aaPredicted RBP29.19■■■□□ 2.26
VPS37C-202ENST00000535818 ADRA2BP18089 450 aa29.19■■■□□ 2.26
VPS37C-202ENST00000535818 SGIP1Q9BQI5 828 aa29.19■■■□□ 2.26
VPS37C-202ENST00000535818 STARD3NLO95772 234 aa29.18■■■□□ 2.26
VPS37C-202ENST00000535818 TEX13AQ9BXU3 409 aaPredicted RBP29.18■■■□□ 2.26
VPS37C-202ENST00000535818 MIS18AQ9NYP9 233 aa29.18■■■□□ 2.26
VPS37C-202ENST00000535818 INTS5Q6P9B9 1019 aaKnown RBP29.17■■■□□ 2.26
VPS37C-202ENST00000535818 RFC4P35249 363 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms