RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 KIAA1328Q86T90 577 aa21.26■□□□□ 0.99
SFSWAP-203ENST00000535236 CCDC66A2RUB6 948 aa21.25■□□□□ 0.99
SFSWAP-203ENST00000535236 GBP2P32456 591 aaPredicted RBP21.25■□□□□ 0.99
SFSWAP-203ENST00000535236 MCM10Q7L590 875 aa21.25■□□□□ 0.99
SFSWAP-203ENST00000535236 EPB41L2O43491 1005 aaKnown RBP21.25■□□□□ 0.99
SFSWAP-203ENST00000535236 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
SFSWAP-203ENST00000535236 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
SFSWAP-203ENST00000535236 GLRX3O76003 335 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 CHMP4BP1P59074 171 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 ZNF397Q8NF99 534 aaPredicted RBP21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 MPNDQ8N594 471 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 NAPBQ9H115 298 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 AKNAQ7Z591 1439 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 TMEM57Q8N5G2 664 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 GOLGA6L7A0A1B0GV03 622 aa21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 EIF3JO75822 258 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-203ENST00000535236 AMOTQ4VCS5 1084 aa21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 KIAA0754O94854 1291 aa21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 MX1P20591 662 aa21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 CETN2P41208 172 aa21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 MAP3K12Q12852 859 aa21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 IFIT5Q13325 482 aaKnown RBP21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
SFSWAP-203ENST00000535236 CCDC196A0A1B0GTZ2 297 aa21.22■□□□□ 0.99
SFSWAP-203ENST00000535236 SLC5A1P13866 664 aa21.22■□□□□ 0.99
SFSWAP-203ENST00000535236 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
SFSWAP-203ENST00000535236 CCDC96Q2M329 555 aa21.22■□□□□ 0.99
SFSWAP-203ENST00000535236 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
SFSWAP-203ENST00000535236 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 FILIP1Q7Z7B0 1213 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 FAM193AP78312 1265 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 TTLL12Q14166 644 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 MPRIPQ6WCQ1 1025 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 PRPF40BQ6NWY9 871 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 CUL5Q93034 780 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 PLCD4Q9BRC7 762 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 CCDC97Q96F63 343 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 TSG101Q99816 390 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 BOLA2Q9H3K6 86 aa21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 CIZ1Q9ULV3 898 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-203ENST00000535236 ARHGAP29Q52LW3 1261 aa21.2■□□□□ 0.98
SFSWAP-203ENST00000535236 CFAP100Q494V2 611 aa21.2■□□□□ 0.98
SFSWAP-203ENST00000535236 SLF2Q8IX21 1173 aa21.2■□□□□ 0.98
SFSWAP-203ENST00000535236 HECW1Q76N89 1606 aa21.2■□□□□ 0.98
SFSWAP-203ENST00000535236 MAP3K11Q16584 847 aa21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 WAPLQ7Z5K2 1190 aa21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 BACH2Q9BYV9 841 aa21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 RANBP6O60518 1105 aaKnown RBP21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 WDR78Q5VTH9 848 aa21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 CCDC83Q8IWF9 413 aa21.19■□□□□ 0.98
SFSWAP-203ENST00000535236 GRPEL1Q9HAV7 217 aa21.18■□□□□ 0.98
SFSWAP-203ENST00000535236 IQCA1Q86XH1 822 aa21.18■□□□□ 0.98
SFSWAP-203ENST00000535236 PHAXQ9H814 394 aaKnown RBP21.18■□□□□ 0.98
SFSWAP-203ENST00000535236 RAB34Q9BZG1 259 aa21.18■□□□□ 0.98
SFSWAP-203ENST00000535236 FKBP15Q5T1M5 1219 aa21.18■□□□□ 0.98
SFSWAP-203ENST00000535236 UBA5Q9GZZ9 404 aa21.18■□□□□ 0.98
SFSWAP-203ENST00000535236 ANKRD18BA2A2Z9 1011 aa21.17■□□□□ 0.98
SFSWAP-203ENST00000535236 CCDC148Q8NFR7 591 aa21.17■□□□□ 0.98
SFSWAP-203ENST00000535236 DAPK1P53355 1430 aa21.17■□□□□ 0.98
SFSWAP-203ENST00000535236 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
SFSWAP-203ENST00000535236 SPA17Q15506 151 aa21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 TMEM266Q2M3C6 531 aa21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 FERMT3Q86UX7 667 aa21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 EHMT1Q9H9B1 1298 aa21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 PAXIP1Q6ZW49 1069 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 SLFN5Q08AF3 891 aa21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 SMARCA5O60264 1052 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-203ENST00000535236 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 SLC12A7Q9Y666 1083 aa21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 PHF8Q9UPP1 1060 aa21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 CAMK4Q16566 473 aa21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 ZNF219Q9P2Y4 722 aaPredicted RBP21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 HMGB1P09429 215 aaKnown RBP21.15■□□□□ 0.98
SFSWAP-203ENST00000535236 ZNF213O14771 459 aa21.14■□□□□ 0.98
SFSWAP-203ENST00000535236 C8orf76Q96K31 380 aa21.14■□□□□ 0.98
SFSWAP-203ENST00000535236 RBM10P98175 930 aaKnown RBP21.14■□□□□ 0.97
SFSWAP-203ENST00000535236 NGLY1Q96IV0 654 aa21.14■□□□□ 0.97
SFSWAP-203ENST00000535236 ANAPC15P60006 121 aa21.14■□□□□ 0.97
SFSWAP-203ENST00000535236 CACNA2D4Q7Z3S7 1137 aa21.14■□□□□ 0.97
SFSWAP-203ENST00000535236 VPS36Q86VN1 386 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 EPRSP07814 1512 aaKnown RBP21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 HYPKQ9NX55 129 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 EXOC5O00471 708 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 ALDH1L2Q3SY69 923 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 CCDC8Q9H0W5 538 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 KLHL10Q6JEL2 608 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 CCDC150Q8NCX0 1101 aa21.13■□□□□ 0.97
SFSWAP-203ENST00000535236 CCDC194A0A1B0GVG4 234 aa21.12■□□□□ 0.97
SFSWAP-203ENST00000535236 MYCNP04198 464 aaPredicted RBP21.12■□□□□ 0.97
SFSWAP-203ENST00000535236 NME9Q86XW9 330 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms