RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GNAI1P63096 354 aa15.97■□□□□ 0.15
SCARB1-204ENST00000535005 TEFQ10587 303 aa15.97■□□□□ 0.15
SCARB1-204ENST00000535005 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-204ENST00000535005 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
SCARB1-204ENST00000535005 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
SCARB1-204ENST00000535005 RGS12O14924 1447 aa15.96■□□□□ 0.15
SCARB1-204ENST00000535005 CHL1O00533 1208 aa15.96■□□□□ 0.15
SCARB1-204ENST00000535005 KRT27Q7Z3Y8 459 aa15.96■□□□□ 0.15
SCARB1-204ENST00000535005 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-204ENST00000535005 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.14
SCARB1-204ENST00000535005 CDCA7LQ96GN5 454 aa15.96■□□□□ 0.14
SCARB1-204ENST00000535005 CABP4P57796 275 aa15.95■□□□□ 0.14
SCARB1-204ENST00000535005 MYH16Q9H6N6 1097 aa15.95■□□□□ 0.14
SCARB1-204ENST00000535005 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
SCARB1-204ENST00000535005 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
SCARB1-204ENST00000535005 BRWD3Q6RI45 1802 aa15.94■□□□□ 0.14
SCARB1-204ENST00000535005 MSH5O43196 834 aa15.94■□□□□ 0.14
SCARB1-204ENST00000535005 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
SCARB1-204ENST00000535005 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
SCARB1-204ENST00000535005 SIPA1L3O60292 1781 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-204ENST00000535005 DUSP27Q5VZP5 1158 aa15.92■□□□□ 0.14
SCARB1-204ENST00000535005 FAM196AQ6ZSG2 479 aa15.92■□□□□ 0.14
SCARB1-204ENST00000535005 BTBD11A6QL63 1104 aa15.91■□□□□ 0.14
SCARB1-204ENST00000535005 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
SCARB1-204ENST00000535005 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
SCARB1-204ENST00000535005 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
SCARB1-204ENST00000535005 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
SCARB1-204ENST00000535005 PIGBQ92521 554 aa15.91■□□□□ 0.14
SCARB1-204ENST00000535005 TSPYL4Q9UJ04 414 aa15.91■□□□□ 0.14
SCARB1-204ENST00000535005 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
SCARB1-204ENST00000535005 DOT1LQ8TEK3 1739 aa15.9■□□□□ 0.14
SCARB1-204ENST00000535005 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
SCARB1-204ENST00000535005 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
SCARB1-204ENST00000535005 ITGB4P16144 1822 aa15.89■□□□□ 0.13
SCARB1-204ENST00000535005 ACSBG1Q96GR2 724 aa15.89■□□□□ 0.13
SCARB1-204ENST00000535005 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
SCARB1-204ENST00000535005 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
SCARB1-204ENST00000535005 KCNQ2O43526 872 aa15.87■□□□□ 0.13
SCARB1-204ENST00000535005 NHSQ6T4R5 1651 aa15.87■□□□□ 0.13
SCARB1-204ENST00000535005 EIF4A1P60842 406 aaKnown RBP15.87■□□□□ 0.13
SCARB1-204ENST00000535005 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
SCARB1-204ENST00000535005 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
SCARB1-204ENST00000535005 KCNQ3O43525 872 aa15.86■□□□□ 0.13
SCARB1-204ENST00000535005 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
SCARB1-204ENST00000535005 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
SCARB1-204ENST00000535005 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
SCARB1-204ENST00000535005 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
SCARB1-204ENST00000535005 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
SCARB1-204ENST00000535005 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
SCARB1-204ENST00000535005 TTC5Q8N0Z6 440 aa15.85■□□□□ 0.13
SCARB1-204ENST00000535005 SOS1Q07889 1333 aaPredicted RBP15.85■□□□□ 0.13
SCARB1-204ENST00000535005 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
SCARB1-204ENST00000535005 ASAP1Q9ULH1 1129 aa15.84■□□□□ 0.13
SCARB1-204ENST00000535005 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
SCARB1-204ENST00000535005 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
SCARB1-204ENST00000535005 KAT6BQ8WYB5 2073 aa15.84■□□□□ 0.13
SCARB1-204ENST00000535005 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.12
SCARB1-204ENST00000535005 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
SCARB1-204ENST00000535005 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
SCARB1-204ENST00000535005 HOXB7P09629 217 aa15.82■□□□□ 0.12
SCARB1-204ENST00000535005 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
SCARB1-204ENST00000535005 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
SCARB1-204ENST00000535005 VSIG10Q8N0Z9 540 aa15.82■□□□□ 0.12
SCARB1-204ENST00000535005 VAMP4O75379 141 aa15.81■□□□□ 0.12
SCARB1-204ENST00000535005 GIGYF1O75420 1035 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-204ENST00000535005 KRT24Q2M2I5 525 aa15.81■□□□□ 0.12
SCARB1-204ENST00000535005 TWISTNBQ3B726 338 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-204ENST00000535005 TSPYL6Q8N831 410 aa15.81■□□□□ 0.12
SCARB1-204ENST00000535005 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
SCARB1-204ENST00000535005 TRIM37O94972 964 aa15.8■□□□□ 0.12
SCARB1-204ENST00000535005 BTAF1O14981 1849 aa15.8■□□□□ 0.12
SCARB1-204ENST00000535005 SNRPA1P09661 255 aaKnown RBP15.8■□□□□ 0.12
SCARB1-204ENST00000535005 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
SCARB1-204ENST00000535005 PALLDQ8WX93 1383 aa15.79■□□□□ 0.12
SCARB1-204ENST00000535005 PTCD1O75127 700 aaKnown RBP15.79■□□□□ 0.12
SCARB1-204ENST00000535005 ELL2O00472 640 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-204ENST00000535005 EP400Q96L91 3159 aa15.78■□□□□ 0.12
SCARB1-204ENST00000535005 SLC4A9Q96Q91 983 aa15.78■□□□□ 0.12
SCARB1-204ENST00000535005 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-204ENST00000535005 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.11
SCARB1-204ENST00000535005 SIK1P57059 783 aa15.77■□□□□ 0.11
SCARB1-204ENST00000535005 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.11
SCARB1-204ENST00000535005 ZNF831Q5JPB2 1677 aa15.77■□□□□ 0.11
SCARB1-204ENST00000535005 PLSCR1O15162 318 aa15.76■□□□□ 0.11
SCARB1-204ENST00000535005 ALDH1L2Q3SY69 923 aa15.76■□□□□ 0.11
SCARB1-204ENST00000535005 RARSP54136 660 aaKnown RBP15.75■□□□□ 0.11
SCARB1-204ENST00000535005 RCAN3Q9UKA8 241 aa15.75■□□□□ 0.11
SCARB1-204ENST00000535005 CICQ96RK0 1608 aaPredicted RBP15.75■□□□□ 0.11
SCARB1-204ENST00000535005 PRAMEF22A3QJZ6 481 aa15.75■□□□□ 0.11
SCARB1-204ENST00000535005 HDGFL1Q5TGJ6 251 aa15.74■□□□□ 0.11
SCARB1-204ENST00000535005 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
SCARB1-204ENST00000535005 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
SCARB1-204ENST00000535005 LY75O60449 1722 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 APBA3O96018 575 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-204ENST00000535005 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 ERBB4Q15303 1308 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 TNS1Q9HBL0 1735 aaKnown RBP15.73■□□□□ 0.11
SCARB1-204ENST00000535005 STARD3NLO95772 234 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms