RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 SLAIN2Q9P270 581 aa7.75□□□□□ -1.17
ECHDC1-223ENST00000534442 TRPC5Q9UL62 973 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-223ENST00000534442 MYT1LQ9UL68 1186 aa7.75□□□□□ -1.17
ECHDC1-223ENST00000534442 SHANK3Q9BYB0 1731 aa7.75□□□□□ -1.17
ECHDC1-223ENST00000534442 KIF14Q15058 1648 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 ZBTB7CA1YPR0 619 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 LMOD1P29536 600 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 MMP16P51512 607 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 COPS2P61201 443 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 EIF4G2P78344 907 aaKnown RBP eCLIP7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 TBC1D9Q6ZT07 1266 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 SPSB2Q99619 263 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 PRDM9Q9NQV7 894 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 EVA1BQ9NVM1 165 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 DIP2AQ14689 1571 aa7.74□□□□□ -1.17
ECHDC1-223ENST00000534442 ZC3H13Q5T200 1668 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-223ENST00000534442 CTHP32929 405 aa7.73□□□□□ -1.17
ECHDC1-223ENST00000534442 USP21Q9UK80 565 aa7.73□□□□□ -1.17
ECHDC1-223ENST00000534442 MAFBQ9Y5Q3 323 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-223ENST00000534442 AHDC1Q5TGY3 1603 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-223ENST00000534442 ZC3H4Q9UPT8 1303 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-223ENST00000534442 IGF1RP08069 1367 aa7.72□□□□□ -1.17
ECHDC1-223ENST00000534442 ATRNO75882 1429 aa7.72□□□□□ -1.17
ECHDC1-223ENST00000534442 POTEMA6NI47 508 aa7.72□□□□□ -1.17
ECHDC1-223ENST00000534442 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
ECHDC1-223ENST00000534442 KCNH2Q12809 1159 aa7.72□□□□□ -1.17
ECHDC1-223ENST00000534442 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
ECHDC1-223ENST00000534442 AATKQ6ZMQ8 1374 aa7.71□□□□□ -1.17
ECHDC1-223ENST00000534442 ZNF518AQ6AHZ1 1483 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 RALGAPBQ86X10 1494 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 PIK3CDO00329 1044 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 TLL1O43897 1013 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 KCTD17Q8N5Z5 321 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 KCTD12Q96CX2 325 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 OCSTAMPQ9BR26 566 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 SPON1Q9HCB6 807 aa7.71□□□□□ -1.18
ECHDC1-223ENST00000534442 ATP7AQ04656 1500 aa7.7□□□□□ -1.18
ECHDC1-223ENST00000534442 ATP9BO43861 1147 aa7.7□□□□□ -1.18
ECHDC1-223ENST00000534442 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
ECHDC1-223ENST00000534442 AEBP1Q8IUX7 1158 aa7.7□□□□□ -1.18
ECHDC1-223ENST00000534442 THEMISQ8N1K5 641 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-223ENST00000534442 TIAM1Q13009 1591 aa7.69□□□□□ -1.18
ECHDC1-223ENST00000534442 ZPR1O75312 459 aa7.69□□□□□ -1.18
ECHDC1-223ENST00000534442 ADH1BP00325 375 aa7.69□□□□□ -1.18
ECHDC1-223ENST00000534442 MTRQ99707 1265 aa7.69□□□□□ -1.18
ECHDC1-223ENST00000534442 ARHGAP23Q9P227 1491 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 ATG7O95352 703 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 ADAMTS2O95450 1211 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 PDXDC2PQ6P474 469 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 AFAP1Q8N556 730 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 MSH6P52701 1360 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 FAM135AQ9P2D6 1515 aa7.68□□□□□ -1.18
ECHDC1-223ENST00000534442 FAM83GA6ND36 823 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 PTK2Q05397 1052 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 KANK4Q5T7N3 995 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 FAM174AQ8TBP5 190 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 ZNF516Q92618 1163 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 GPKOWQ92917 476 aaPredicted RBP eCLIP7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 UGGT1Q9NYU2 1555 aa7.67□□□□□ -1.18
ECHDC1-223ENST00000534442 KCNQ2O43526 872 aa7.66□□□□□ -1.18
ECHDC1-223ENST00000534442 PDE4CQ08493 712 aa7.66□□□□□ -1.18
ECHDC1-223ENST00000534442 TNRQ92752 1358 aa7.66□□□□□ -1.18
ECHDC1-223ENST00000534442 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
ECHDC1-223ENST00000534442 MLLT1Q03111 559 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 CARMIL1Q5VZK9 1371 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 BRWD3Q6RI45 1802 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 MPNDQ8N594 471 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 JMYQ8N9B5 988 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 CEP126Q9P2H0 1117 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 KIAA1210Q9ULL0 1709 aa7.65□□□□□ -1.18
ECHDC1-223ENST00000534442 TMEM88BA6NKF7 163 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 SKIP12755 728 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 PTPN5P54829 565 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 NBPF14Q5TI25 921 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 SH3BP5LQ7L8J4 393 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 ADAM32Q8TC27 787 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 IL21Q9HBE4 155 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
ECHDC1-223ENST00000534442 NRKQ7Z2Y5 1582 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 USP17L3A6NCW0 530 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 USP17L4A6NCW7 530 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 USP17L5A8MUK1 530 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 USP17L2Q6R6M4 530 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 USP17L1Q7RTZ2 530 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
ECHDC1-223ENST00000534442 CCDC24Q8N4L8 307 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms