RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
PHRF1-206ENST00000534320 SDF4Q9BRK5 362 aa20.47■□□□□ 0.87
PHRF1-206ENST00000534320 SPATA31E1Q6ZUB1 1445 aa20.46■□□□□ 0.87
PHRF1-206ENST00000534320 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
PHRF1-206ENST00000534320 XBP1P17861 261 aa20.46■□□□□ 0.87
PHRF1-206ENST00000534320 ZSCAN31Q96LW9 406 aaPredicted RBP20.46■□□□□ 0.87
PHRF1-206ENST00000534320 TSR1Q2NL82 804 aaKnown RBP20.46■□□□□ 0.87
PHRF1-206ENST00000534320 MRPL50Q8N5N7 158 aaKnown RBP20.46■□□□□ 0.87
PHRF1-206ENST00000534320 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.86
PHRF1-206ENST00000534320 ZSCAN25Q6NSZ9 544 aa20.45■□□□□ 0.86
PHRF1-206ENST00000534320 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
PHRF1-206ENST00000534320 ATP10AO60312 1499 aa20.45■□□□□ 0.86
PHRF1-206ENST00000534320 RRP12Q5JTH9 1297 aaKnown RBP20.45■□□□□ 0.86
PHRF1-206ENST00000534320 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
PHRF1-206ENST00000534320 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
PHRF1-206ENST00000534320 TSPY26PQ9H489 355 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 BRMS1Q9HCU9 246 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 KDM4AO75164 1064 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 KRT32Q14532 448 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 CCDC47Q96A33 483 aaKnown RBP20.44■□□□□ 0.86
PHRF1-206ENST00000534320 NUCB1Q02818 461 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
PHRF1-206ENST00000534320 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
PHRF1-206ENST00000534320 TBC1D9Q6ZT07 1266 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 CADPS2Q86UW7 1296 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 ZNF396Q96N95 335 aaPredicted RBP20.43■□□□□ 0.86
PHRF1-206ENST00000534320 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 PI4KAP2A4QPH2 592 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 PI4KAP1Q8N8J0 262 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 ACBD3Q9H3P7 528 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 PHACTR3Q96KR7 559 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 FLT4P35916 1363 aa20.43■□□□□ 0.86
PHRF1-206ENST00000534320 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
PHRF1-206ENST00000534320 CEP89Q96ST8 783 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 TNNQ9UQP3 1299 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 SAMD9LQ8IVG5 1584 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 ANKRD20A12PQ8NF67 263 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 NACAP1Q9BZK3 213 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 BOLA2Q9H3K6 86 aa20.42■□□□□ 0.86
PHRF1-206ENST00000534320 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
PHRF1-206ENST00000534320 KINO60870 393 aaKnown RBP20.42■□□□□ 0.86
PHRF1-206ENST00000534320 UPF3BQ9BZI7 483 aaKnown RBP20.42■□□□□ 0.86
PHRF1-206ENST00000534320 NAT10Q9H0A0 1025 aaKnown RBP20.42■□□□□ 0.86
PHRF1-206ENST00000534320 CTNNA3Q9UI47 895 aa20.41■□□□□ 0.86
PHRF1-206ENST00000534320 R3HCC1Q9Y3T6 440 aaKnown RBP20.41■□□□□ 0.86
PHRF1-206ENST00000534320 RLBP1P12271 317 aa20.41■□□□□ 0.86
PHRF1-206ENST00000534320 MEIS3Q99687 375 aa20.41■□□□□ 0.86
PHRF1-206ENST00000534320 CCDC39Q9UFE4 941 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 KRT85P78386 507 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 MTHFSDQ2M296 383 aaKnown RBP20.4■□□□□ 0.86
PHRF1-206ENST00000534320 TBC1D32Q96NH3 1257 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 VAMP4O75379 141 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 CEBPZQ03701 1054 aaKnown RBP20.4■□□□□ 0.86
PHRF1-206ENST00000534320 SLC3A2P08195 630 aaKnown RBP20.4■□□□□ 0.86
PHRF1-206ENST00000534320 CCDC8Q9H0W5 538 aaPredicted RBP20.4■□□□□ 0.86
PHRF1-206ENST00000534320 NEO1Q92859 1461 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 TTC22Q5TAA0 569 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
PHRF1-206ENST00000534320 PRPF40BQ6NWY9 871 aaKnown RBP20.39■□□□□ 0.85
PHRF1-206ENST00000534320 STK38Q15208 465 aa20.39■□□□□ 0.85
PHRF1-206ENST00000534320 A0A087WZG4 1122 aa20.39■□□□□ 0.85
PHRF1-206ENST00000534320 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
PHRF1-206ENST00000534320 AKAP2Q9Y2D5 859 aa20.39■□□□□ 0.85
PHRF1-206ENST00000534320 PIP4K2BP78356 416 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 CHRNA2Q15822 529 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
PHRF1-206ENST00000534320 ANXA1P04083 346 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 HSP90B2PQ58FF3 399 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
PHRF1-206ENST00000534320 METTL24Q5JXM2 366 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 MTMR7Q9Y216 660 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 TRPM2O94759 1503 aa20.38■□□□□ 0.85
PHRF1-206ENST00000534320 PTPRTO14522 1441 aa20.37■□□□□ 0.85
PHRF1-206ENST00000534320 ANKRD44Q8N8A2 993 aa20.37■□□□□ 0.85
PHRF1-206ENST00000534320 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
PHRF1-206ENST00000534320 ATP2B1P20020 1258 aa20.37■□□□□ 0.85
PHRF1-206ENST00000534320 RDXP35241 583 aaKnown RBP20.37■□□□□ 0.85
PHRF1-206ENST00000534320 HOMER1Q86YM7 354 aa20.37■□□□□ 0.85
PHRF1-206ENST00000534320 OLFM4Q6UX06 510 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 GRPEL1Q9HAV7 217 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 CCDC173Q0VFZ6 552 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 ECHDC1Q9NTX5 307 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 CHPF2Q9P2E5 772 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 KCNA6P17658 529 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 IGHMBP2P38935 993 aaKnown RBP20.36■□□□□ 0.85
PHRF1-206ENST00000534320 CDR1P51861 262 aa20.36■□□□□ 0.85
PHRF1-206ENST00000534320 INSRP06213 1382 aa20.35■□□□□ 0.85
PHRF1-206ENST00000534320 RRP9O43818 475 aaKnown RBP20.35■□□□□ 0.85
PHRF1-206ENST00000534320 IDH1O75874 414 aaKnown RBP20.35■□□□□ 0.85
PHRF1-206ENST00000534320 AKAP4Q5JQC9 854 aa20.35■□□□□ 0.85
PHRF1-206ENST00000534320 EDC4Q6P2E9 1401 aaKnown RBP20.35■□□□□ 0.85
PHRF1-206ENST00000534320 SNRPA1P09661 255 aaKnown RBP20.35■□□□□ 0.85
PHRF1-206ENST00000534320 AK7Q96M32 723 aa20.35■□□□□ 0.85
PHRF1-206ENST00000534320 EYA1Q99502 592 aa20.35■□□□□ 0.85
PHRF1-206ENST00000534320 IFIT1P09914 478 aaKnown RBP20.34■□□□□ 0.85
PHRF1-206ENST00000534320 PDIA4P13667 645 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms