RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 SLC52A2Q9HAB3 445 aa23.22■■□□□ 1.31
NXF1-217ENST00000533671 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
NXF1-217ENST00000533671 ANP32CO43423 234 aa23.21■■□□□ 1.31
NXF1-217ENST00000533671 SIK1P57059 783 aa23.21■■□□□ 1.31
NXF1-217ENST00000533671 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
NXF1-217ENST00000533671 TFCP2L1Q9NZI6 479 aa23.21■■□□□ 1.31
NXF1-217ENST00000533671 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
NXF1-217ENST00000533671 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
NXF1-217ENST00000533671 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
NXF1-217ENST00000533671 TEFQ10587 303 aa23.19■■□□□ 1.3
NXF1-217ENST00000533671 ZNF827Q17R98 1081 aa23.19■■□□□ 1.3
NXF1-217ENST00000533671 AKT1S1Q96B36 256 aa23.18■■□□□ 1.3
NXF1-217ENST00000533671 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
NXF1-217ENST00000533671 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
NXF1-217ENST00000533671 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
NXF1-217ENST00000533671 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
NXF1-217ENST00000533671 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
NXF1-217ENST00000533671 CASZ1Q86V15 1759 aa23.15■■□□□ 1.3
NXF1-217ENST00000533671 MSH5O43196 834 aa23.15■■□□□ 1.3
NXF1-217ENST00000533671 IL17REQ8NFR9 667 aa23.15■■□□□ 1.3
NXF1-217ENST00000533671 AK7Q96M32 723 aa23.15■■□□□ 1.3
NXF1-217ENST00000533671 MRC1P22897 1456 aa23.15■■□□□ 1.3
NXF1-217ENST00000533671 C4BP0C0L5 1744 aa23.14■■□□□ 1.3
NXF1-217ENST00000533671 PLEKHF1Q96S99 279 aa23.14■■□□□ 1.29
NXF1-217ENST00000533671 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
NXF1-217ENST00000533671 LRP5O75197 1615 aa23.14■■□□□ 1.29
NXF1-217ENST00000533671 PDGFDQ9GZP0 370 aaPredicted RBP23.13■■□□□ 1.29
NXF1-217ENST00000533671 ZBTB7AO95365 584 aa23.12■■□□□ 1.29
NXF1-217ENST00000533671 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
NXF1-217ENST00000533671 TTC5Q8N0Z6 440 aa23.12■■□□□ 1.29
NXF1-217ENST00000533671 HTATSF1O43719 755 aaKnown RBP23.11■■□□□ 1.29
NXF1-217ENST00000533671 ITPK1Q13572 414 aa23.11■■□□□ 1.29
NXF1-217ENST00000533671 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
NXF1-217ENST00000533671 MCM10Q7L590 875 aa23.11■■□□□ 1.29
NXF1-217ENST00000533671 LINC00116Q8NCU8 138 aa23.11■■□□□ 1.29
NXF1-217ENST00000533671 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
NXF1-217ENST00000533671 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
NXF1-217ENST00000533671 PNPLA7Q6ZV29 1317 aa23.09■■□□□ 1.29
NXF1-217ENST00000533671 DCTN1Q14203 1278 aa23.09■■□□□ 1.29
NXF1-217ENST00000533671 CCDC146Q8IYE0 955 aa23.09■■□□□ 1.29
NXF1-217ENST00000533671 ATF5Q9Y2D1 282 aaPredicted RBP23.09■■□□□ 1.29
NXF1-217ENST00000533671 FLAD1Q8NFF5 587 aa23.08■■□□□ 1.29
NXF1-217ENST00000533671 SLC4A9Q96Q91 983 aa23.08■■□□□ 1.29
NXF1-217ENST00000533671 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
NXF1-217ENST00000533671 ADAMTS8Q9UP79 889 aa23.08■■□□□ 1.29
NXF1-217ENST00000533671 CEMIPQ8WUJ3 1361 aa23.08■■□□□ 1.29
NXF1-217ENST00000533671 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
NXF1-217ENST00000533671 BTBD11A6QL63 1104 aa23.07■■□□□ 1.28
NXF1-217ENST00000533671 GNPATO15228 680 aa23.07■■□□□ 1.28
NXF1-217ENST00000533671 PHF14O94880 888 aa23.07■■□□□ 1.28
NXF1-217ENST00000533671 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
NXF1-217ENST00000533671 MTFR1LQ9H019 292 aa23.07■■□□□ 1.28
NXF1-217ENST00000533671 COL5A3P25940 1745 aaPredicted RBP23.06■■□□□ 1.28
NXF1-217ENST00000533671 SLC16A10Q8TF71 515 aa23.06■■□□□ 1.28
NXF1-217ENST00000533671 RIPK4P57078 832 aa23.05■■□□□ 1.28
NXF1-217ENST00000533671 COL23A1Q86Y22 540 aaPredicted RBP23.05■■□□□ 1.28
NXF1-217ENST00000533671 ZNF790Q6PG37 636 aa23.04■■□□□ 1.28
NXF1-217ENST00000533671 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
NXF1-217ENST00000533671 TJP1Q07157 1748 aa23.04■■□□□ 1.28
NXF1-217ENST00000533671 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
NXF1-217ENST00000533671 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
NXF1-217ENST00000533671 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
NXF1-217ENST00000533671 RTCBQ9Y3I0 505 aaKnown RBP23.03■■□□□ 1.28
NXF1-217ENST00000533671 KCPQ6ZWJ8 1503 aa23.03■■□□□ 1.28
NXF1-217ENST00000533671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.02■■□□□ 1.28
NXF1-217ENST00000533671 SSFA2P28290 1259 aa23.02■■□□□ 1.28
NXF1-217ENST00000533671 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
NXF1-217ENST00000533671 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
NXF1-217ENST00000533671 DNAJC10Q8IXB1 793 aa23.02■■□□□ 1.28
NXF1-217ENST00000533671 CNTNAP4Q9C0A0 1308 aa23.02■■□□□ 1.28
NXF1-217ENST00000533671 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
NXF1-217ENST00000533671 CCDC184Q52MB2 194 aa23.01■■□□□ 1.27
NXF1-217ENST00000533671 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
NXF1-217ENST00000533671 FMNL2Q96PY5 1086 aa23.01■■□□□ 1.27
NXF1-217ENST00000533671 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
NXF1-217ENST00000533671 MYH14Q7Z406 1995 aaKnown RBP23.01■■□□□ 1.27
NXF1-217ENST00000533671 POLD1P28340 1107 aa23■■□□□ 1.27
NXF1-217ENST00000533671 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
NXF1-217ENST00000533671 SMIM5Q71RC9 77 aa23■■□□□ 1.27
NXF1-217ENST00000533671 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
NXF1-217ENST00000533671 CICQ96RK0 1608 aaPredicted RBP23■■□□□ 1.27
NXF1-217ENST00000533671 TRAPPC3LQ5T215 181 aa22.99■■□□□ 1.27
NXF1-217ENST00000533671 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
NXF1-217ENST00000533671 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
NXF1-217ENST00000533671 RPS6KA4O75676 772 aa22.98■■□□□ 1.27
NXF1-217ENST00000533671 HEG1Q9ULI3 1381 aa22.98■■□□□ 1.27
NXF1-217ENST00000533671 KCNQ3O43525 872 aa22.97■■□□□ 1.27
NXF1-217ENST00000533671 STARD3NLO95772 234 aa22.97■■□□□ 1.27
NXF1-217ENST00000533671 MSL1Q68DK7 614 aa22.97■■□□□ 1.27
NXF1-217ENST00000533671 AMIGO3Q86WK7 504 aa22.97■■□□□ 1.27
NXF1-217ENST00000533671 TEX13AQ9BXU3 409 aaPredicted RBP22.97■■□□□ 1.27
NXF1-217ENST00000533671 CCDC87Q9NVE4 849 aa22.97■■□□□ 1.27
NXF1-217ENST00000533671 PTGER2P43116 358 aa22.96■■□□□ 1.27
NXF1-217ENST00000533671 MIS18AQ9NYP9 233 aa22.96■■□□□ 1.27
NXF1-217ENST00000533671 CYP19A1P11511 503 aaPredicted RBP22.95■■□□□ 1.26
NXF1-217ENST00000533671 ADRA2BP18089 450 aa22.95■■□□□ 1.26
NXF1-217ENST00000533671 RFC4P35249 363 aa22.95■■□□□ 1.26
NXF1-217ENST00000533671 ARXQ96QS3 562 aa22.94■■□□□ 1.26
NXF1-217ENST00000533671 APAF1O14727 1248 aa22.93■■□□□ 1.26
NXF1-217ENST00000533671 INTS5Q6P9B9 1019 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms