RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-214ENST00000533632 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
TRAPPC4-214ENST00000533632 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
TRAPPC4-214ENST00000533632 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC4-214ENST00000533632 MRC1P22897 1456 aa17.56■□□□□ 0.4
TRAPPC4-214ENST00000533632 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
TRAPPC4-214ENST00000533632 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
TRAPPC4-214ENST00000533632 LY75O60449 1722 aa17.55■□□□□ 0.4
TRAPPC4-214ENST00000533632 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
TRAPPC4-214ENST00000533632 APBA3O96018 575 aa17.54■□□□□ 0.4
TRAPPC4-214ENST00000533632 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC4-214ENST00000533632 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
TRAPPC4-214ENST00000533632 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
TRAPPC4-214ENST00000533632 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
TRAPPC4-214ENST00000533632 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
TRAPPC4-214ENST00000533632 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-214ENST00000533632 SF3B2Q13435 895 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-214ENST00000533632 WDR63Q8IWG1 891 aa17.52■□□□□ 0.4
TRAPPC4-214ENST00000533632 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC4-214ENST00000533632 PLSCR1O15162 318 aa17.51■□□□□ 0.39
TRAPPC4-214ENST00000533632 BAG6P46379 1132 aa17.51■□□□□ 0.39
TRAPPC4-214ENST00000533632 EZH2Q15910 746 aaKnown RBP17.51■□□□□ 0.39
TRAPPC4-214ENST00000533632 PROM2Q8N271 834 aa17.51■□□□□ 0.39
TRAPPC4-214ENST00000533632 PIGBQ92521 554 aa17.51■□□□□ 0.39
TRAPPC4-214ENST00000533632 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
TRAPPC4-214ENST00000533632 PAPPAQ13219 1627 aa17.5■□□□□ 0.39
TRAPPC4-214ENST00000533632 ZNF853P0CG23 659 aa17.5■□□□□ 0.39
TRAPPC4-214ENST00000533632 GOLGA2Q08379 1002 aa17.5■□□□□ 0.39
TRAPPC4-214ENST00000533632 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
TRAPPC4-214ENST00000533632 SLC52A2Q9HAB3 445 aa17.49■□□□□ 0.39
TRAPPC4-214ENST00000533632 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
TRAPPC4-214ENST00000533632 IL16Q14005 1332 aa17.49■□□□□ 0.39
TRAPPC4-214ENST00000533632 SLFN5Q08AF3 891 aa17.48■□□□□ 0.39
TRAPPC4-214ENST00000533632 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
TRAPPC4-214ENST00000533632 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-214ENST00000533632 TEFQ10587 303 aa17.47■□□□□ 0.39
TRAPPC4-214ENST00000533632 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-214ENST00000533632 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
TRAPPC4-214ENST00000533632 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
TRAPPC4-214ENST00000533632 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-214ENST00000533632 TAF1LQ8IZX4 1826 aa17.46■□□□□ 0.39
TRAPPC4-214ENST00000533632 CHL1O00533 1208 aa17.46■□□□□ 0.39
TRAPPC4-214ENST00000533632 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-214ENST00000533632 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
TRAPPC4-214ENST00000533632 TMOD3Q9NYL9 352 aa17.46■□□□□ 0.39
TRAPPC4-214ENST00000533632 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.39
TRAPPC4-214ENST00000533632 UBR2Q8IWV8 1755 aa17.46■□□□□ 0.38
TRAPPC4-214ENST00000533632 CABP4P57796 275 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 ASAP1Q9ULH1 1129 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 E9PSI1 815 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 KCNQ3O43525 872 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
TRAPPC4-214ENST00000533632 GNAI1P63096 354 aa17.44■□□□□ 0.38
TRAPPC4-214ENST00000533632 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
TRAPPC4-214ENST00000533632 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
TRAPPC4-214ENST00000533632 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
TRAPPC4-214ENST00000533632 ZNF831Q5JPB2 1677 aa17.43■□□□□ 0.38
TRAPPC4-214ENST00000533632 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
TRAPPC4-214ENST00000533632 TSPYL4Q9UJ04 414 aa17.43■□□□□ 0.38
TRAPPC4-214ENST00000533632 C5P01031 1676 aa17.42■□□□□ 0.38
TRAPPC4-214ENST00000533632 KCNQ4P56696 695 aa17.42■□□□□ 0.38
TRAPPC4-214ENST00000533632 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
TRAPPC4-214ENST00000533632 NEFLP07196 543 aa17.41■□□□□ 0.38
TRAPPC4-214ENST00000533632 KRT24Q2M2I5 525 aa17.41■□□□□ 0.38
TRAPPC4-214ENST00000533632 MYH16Q9H6N6 1097 aa17.41■□□□□ 0.38
TRAPPC4-214ENST00000533632 CICQ96RK0 1608 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC4-214ENST00000533632 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
TRAPPC4-214ENST00000533632 BABAM1Q9NWV8 329 aa17.4■□□□□ 0.38
TRAPPC4-214ENST00000533632 TJP1Q07157 1748 aa17.4■□□□□ 0.38
TRAPPC4-214ENST00000533632 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
TRAPPC4-214ENST00000533632 COL5A3P25940 1745 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-214ENST00000533632 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
TRAPPC4-214ENST00000533632 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC4-214ENST00000533632 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC4-214ENST00000533632 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-214ENST00000533632 TSPYL6Q8N831 410 aa17.38■□□□□ 0.37
TRAPPC4-214ENST00000533632 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-214ENST00000533632 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
TRAPPC4-214ENST00000533632 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
TRAPPC4-214ENST00000533632 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
TRAPPC4-214ENST00000533632 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
TRAPPC4-214ENST00000533632 SIK1P57059 783 aa17.37■□□□□ 0.37
TRAPPC4-214ENST00000533632 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-214ENST00000533632 CCNL1Q9UK58 526 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-214ENST00000533632 MYH14Q7Z406 1995 aaKnown RBP17.36■□□□□ 0.37
TRAPPC4-214ENST00000533632 ITPK1Q13572 414 aa17.36■□□□□ 0.37
TRAPPC4-214ENST00000533632 C4BP0C0L5 1744 aa17.36■□□□□ 0.37
TRAPPC4-214ENST00000533632 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-214ENST00000533632 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
TRAPPC4-214ENST00000533632 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
TRAPPC4-214ENST00000533632 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-214ENST00000533632 ZNF827Q17R98 1081 aa17.34■□□□□ 0.37
TRAPPC4-214ENST00000533632 UBR3Q6ZT12 1888 aa17.34■□□□□ 0.37
TRAPPC4-214ENST00000533632 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
TRAPPC4-214ENST00000533632 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
TRAPPC4-214ENST00000533632 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.37
TRAPPC4-214ENST00000533632 AKT1S1Q96B36 256 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms