RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 PDILTQ8N807 584 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 VGLL3A8MV65 326 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 G3BP1Q13283 466 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHEK1-213ENST00000532449 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
CHEK1-213ENST00000532449 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
CHEK1-213ENST00000532449 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
CHEK1-213ENST00000532449 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 GNAI3P08754 354 aa12.88□□□□□ -0.35
CHEK1-213ENST00000532449 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
CHEK1-213ENST00000532449 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
CHEK1-213ENST00000532449 STX6O43752 255 aa12.88□□□□□ -0.35
CHEK1-213ENST00000532449 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
CHEK1-213ENST00000532449 POLR3GO15318 223 aaPredicted RBP12.88□□□□□ -0.35
CHEK1-213ENST00000532449 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
CHEK1-213ENST00000532449 TNNT1P13805 278 aa12.88□□□□□ -0.35
CHEK1-213ENST00000532449 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 GCC2Q8IWJ2 1684 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 ME1P48163 572 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
CHEK1-213ENST00000532449 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 CCT2P78371 535 aaKnown RBP12.87□□□□□ -0.35
CHEK1-213ENST00000532449 PDE4CQ08493 712 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 ESYT1Q9BSJ8 1104 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
CHEK1-213ENST00000532449 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
CHEK1-213ENST00000532449 LRMPQ12912 555 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 FLIIQ13045 1269 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 KRT85P78386 507 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 UNC5CLQ8IV45 518 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
CHEK1-213ENST00000532449 APPP05067 770 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 AK2P54819 239 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 DACT1Q9NYF0 836 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 MSH6P52701 1360 aa12.85□□□□□ -0.35
CHEK1-213ENST00000532449 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
CHEK1-213ENST00000532449 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
CHEK1-213ENST00000532449 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
CHEK1-213ENST00000532449 CHST3Q7LGC8 479 aa12.84□□□□□ -0.35
CHEK1-213ENST00000532449 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
CHEK1-213ENST00000532449 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
CHEK1-213ENST00000532449 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
CHEK1-213ENST00000532449 SYT1P21579 422 aa12.83□□□□□ -0.35
CHEK1-213ENST00000532449 MCM2P49736 904 aa12.83□□□□□ -0.35
CHEK1-213ENST00000532449 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.35
CHEK1-213ENST00000532449 NAA30Q147X3 362 aaPredicted RBP12.83□□□□□ -0.35
CHEK1-213ENST00000532449 BLOC1S2Q6QNY1 142 aa12.83□□□□□ -0.35
CHEK1-213ENST00000532449 STAC3Q96MF2 364 aa12.83□□□□□ -0.35
CHEK1-213ENST00000532449 MBD5Q9P267 1494 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 RTEL1-TNFRSF6BF6WH68 1400 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 ABCC11Q96J66 1382 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
CHEK1-213ENST00000532449 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 CPLX1O14810 134 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
CHEK1-213ENST00000532449 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 KIF2CQ99661 725 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 PI4KAP1Q8N8J0 262 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 KLHDC4Q8TBB5 520 aa12.83□□□□□ -0.36
CHEK1-213ENST00000532449 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
CHEK1-213ENST00000532449 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
CHEK1-213ENST00000532449 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
CHEK1-213ENST00000532449 ZNF165P49910 485 aa12.82□□□□□ -0.36
CHEK1-213ENST00000532449 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
CHEK1-213ENST00000532449 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
CHEK1-213ENST00000532449 MTERF4Q7Z6M4 381 aaKnown RBP12.81□□□□□ -0.36
CHEK1-213ENST00000532449 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
CHEK1-213ENST00000532449 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
CHEK1-213ENST00000532449 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
CHEK1-213ENST00000532449 CHMLP26374 656 aa12.81□□□□□ -0.36
CHEK1-213ENST00000532449 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CHEK1-213ENST00000532449 EDC3Q96F86 508 aaKnown RBP12.8□□□□□ -0.36
CHEK1-213ENST00000532449 PYCARDQ9ULZ3 195 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 AK9Q5TCS8 1911 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 ZNF445P59923 1031 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms