RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 SHROOM2Q13796 1616 aa14.05□□□□□ -0.16
CSRP1-215ENST00000532313 GNPATO15228 680 aa14.05□□□□□ -0.16
CSRP1-215ENST00000532313 RBM6P78332 1123 aaKnown RBP14.05□□□□□ -0.16
CSRP1-215ENST00000532313 CCDC47Q96A33 483 aaKnown RBP14.05□□□□□ -0.16
CSRP1-215ENST00000532313 OGFOD1Q8N543 542 aa14.05□□□□□ -0.16
CSRP1-215ENST00000532313 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
CSRP1-215ENST00000532313 H3BQV1 296 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 PSMA5P28066 241 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 IFFO2Q5TF58 517 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 DNAJC2Q99543 621 aaKnown RBP14.04□□□□□ -0.16
CSRP1-215ENST00000532313 UTP14AQ9BVJ6 771 aaKnown RBP14.04□□□□□ -0.16
CSRP1-215ENST00000532313 AGLP35573 1532 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 PTPRCP08575 1304 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
CSRP1-215ENST00000532313 RPAP2Q8IXW5 612 aaPredicted RBP14.04□□□□□ -0.16
CSRP1-215ENST00000532313 ATP6V1DQ9Y5K8 247 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 DISP3Q9P2K9 1392 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 EIF4A2Q14240 407 aaKnown RBP14.04□□□□□ -0.16
CSRP1-215ENST00000532313 PARP10Q53GL7 1025 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 SUPT20HQ8NEM7 779 aa14.04□□□□□ -0.16
CSRP1-215ENST00000532313 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
CSRP1-215ENST00000532313 SF3A1Q15459 793 aaKnown RBP14.03□□□□□ -0.16
CSRP1-215ENST00000532313 ZGPATQ8N5A5 531 aaKnown RBP14.03□□□□□ -0.16
CSRP1-215ENST00000532313 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 DZIP3Q86Y13 1208 aaKnown RBP14.03□□□□□ -0.16
CSRP1-215ENST00000532313 DZIP1Q86YF9 867 aaKnown RBP14.03□□□□□ -0.16
CSRP1-215ENST00000532313 ZBTB3Q9H5J0 574 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 ANO2Q9NQ90 1003 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 MAP3K19Q56UN5 1328 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 TPM4P67936 248 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 ANKRD18AQ8IVF6 992 aa14.03□□□□□ -0.16
CSRP1-215ENST00000532313 SRGAP3O43295 1099 aa14.02□□□□□ -0.16
CSRP1-215ENST00000532313 L1TD1Q5T7N2 865 aaKnown RBP14.02□□□□□ -0.16
CSRP1-215ENST00000532313 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.16
CSRP1-215ENST00000532313 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.16
CSRP1-215ENST00000532313 PTPRMP28827 1452 aa14.02□□□□□ -0.16
CSRP1-215ENST00000532313 MAP3K5Q99683 1374 aa14.02□□□□□ -0.16
CSRP1-215ENST00000532313 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.16
CSRP1-215ENST00000532313 NIP7Q9Y221 180 aaKnown RBP eCLIP14.02□□□□□ -0.16
CSRP1-215ENST00000532313 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.17
CSRP1-215ENST00000532313 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.17
CSRP1-215ENST00000532313 PLXNC1O60486 1568 aa14.02□□□□□ -0.17
CSRP1-215ENST00000532313 GSTO1P78417 241 aa14.02□□□□□ -0.17
CSRP1-215ENST00000532313 LRRCC1Q9C099 1032 aa14.02□□□□□ -0.17
CSRP1-215ENST00000532313 NOB1Q9ULX3 412 aaKnown RBP14.02□□□□□ -0.17
CSRP1-215ENST00000532313 PDE6BP35913 854 aa14.01□□□□□ -0.17
CSRP1-215ENST00000532313 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
CSRP1-215ENST00000532313 ERVV-2B6SEH9 535 aa14.01□□□□□ -0.17
CSRP1-215ENST00000532313 RAB11FIP3O75154 756 aa14.01□□□□□ -0.17
CSRP1-215ENST00000532313 GPTP24298 496 aa14.01□□□□□ -0.17
CSRP1-215ENST00000532313 A0A1W2PP64 1363 aa14.01□□□□□ -0.17
CSRP1-215ENST00000532313 POLR3AO14802 1390 aaPredicted RBP14.01□□□□□ -0.17
CSRP1-215ENST00000532313 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
CSRP1-215ENST00000532313 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 CNBD1Q8NA66 436 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 GBP4Q96PP9 640 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 POLKQ9UBT6 870 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 SOGA3Q5TF21 947 aa14□□□□□ -0.17
CSRP1-215ENST00000532313 H0YIN7 160 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 BAG3O95817 575 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 GPR162Q16538 588 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 WWC2Q6AWC2 1192 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 ANKRD2Q9GZV1 360 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 ARHGEF40Q8TER5 1519 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 SIL1Q9H173 461 aa13.99□□□□□ -0.17
CSRP1-215ENST00000532313 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
CSRP1-215ENST00000532313 MYOM2P54296 1465 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 CRBNQ96SW2 442 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 MAP3K4Q9Y6R4 1608 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 MVPQ14764 893 aaKnown RBP13.98□□□□□ -0.17
CSRP1-215ENST00000532313 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 EYA1Q99502 592 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 ZNF804AQ7Z570 1209 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
CSRP1-215ENST00000532313 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
CSRP1-215ENST00000532313 RNMTO43148 476 aaKnown RBP13.98□□□□□ -0.17
CSRP1-215ENST00000532313 USP5P45974 858 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
CSRP1-215ENST00000532313 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 LDHAL6AQ6ZMR3 332 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 NLGN1Q8N2Q7 840 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 AFF2P51816 1311 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 METP08581 1390 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 HLA-DOAP06340 250 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 PTMAP06454 111 aaKnown RBP13.97□□□□□ -0.17
CSRP1-215ENST00000532313 UQCRFS1P1P0C7P4 283 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 EIF6P56537 245 aaKnown RBP13.97□□□□□ -0.17
CSRP1-215ENST00000532313 HOOK2Q96ED9 719 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 BEGAINQ9BUH8 593 aa13.97□□□□□ -0.17
CSRP1-215ENST00000532313 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms