RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
KNL1-208ENST00000532056 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
KNL1-208ENST00000532056 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
KNL1-208ENST00000532056 PROM2Q8N271 834 aa13.28□□□□□ -0.28
KNL1-208ENST00000532056 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
KNL1-208ENST00000532056 RTF1Q92541 710 aaKnown RBP13.28□□□□□ -0.28
KNL1-208ENST00000532056 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
KNL1-208ENST00000532056 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
KNL1-208ENST00000532056 RIPK4P57078 832 aa13.26□□□□□ -0.29
KNL1-208ENST00000532056 TEFQ10587 303 aa13.26□□□□□ -0.29
KNL1-208ENST00000532056 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
KNL1-208ENST00000532056 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
KNL1-208ENST00000532056 MCM10Q7L590 875 aa13.26□□□□□ -0.29
KNL1-208ENST00000532056 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
KNL1-208ENST00000532056 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
KNL1-208ENST00000532056 C5P01031 1676 aa13.25□□□□□ -0.29
KNL1-208ENST00000532056 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
KNL1-208ENST00000532056 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
KNL1-208ENST00000532056 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
KNL1-208ENST00000532056 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
KNL1-208ENST00000532056 APAF1O14727 1248 aa13.24□□□□□ -0.29
KNL1-208ENST00000532056 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
KNL1-208ENST00000532056 MIER1Q8N108 512 aa13.24□□□□□ -0.29
KNL1-208ENST00000532056 LRRC4BQ9NT99 713 aa13.24□□□□□ -0.29
KNL1-208ENST00000532056 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
KNL1-208ENST00000532056 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
KNL1-208ENST00000532056 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
KNL1-208ENST00000532056 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
KNL1-208ENST00000532056 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
KNL1-208ENST00000532056 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
KNL1-208ENST00000532056 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
KNL1-208ENST00000532056 SIK1P57059 783 aa13.22□□□□□ -0.29
KNL1-208ENST00000532056 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
KNL1-208ENST00000532056 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
KNL1-208ENST00000532056 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
KNL1-208ENST00000532056 TJP1Q07157 1748 aa13.22□□□□□ -0.29
KNL1-208ENST00000532056 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
KNL1-208ENST00000532056 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
KNL1-208ENST00000532056 TAF7Q15545 349 aaPredicted RBP13.21□□□□□ -0.29
KNL1-208ENST00000532056 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
KNL1-208ENST00000532056 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.29
KNL1-208ENST00000532056 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
KNL1-208ENST00000532056 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
KNL1-208ENST00000532056 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
KNL1-208ENST00000532056 KCNQ4P56696 695 aa13.2□□□□□ -0.3
KNL1-208ENST00000532056 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
KNL1-208ENST00000532056 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
KNL1-208ENST00000532056 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
KNL1-208ENST00000532056 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
KNL1-208ENST00000532056 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
KNL1-208ENST00000532056 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
KNL1-208ENST00000532056 ITPK1Q13572 414 aa13.19□□□□□ -0.3
KNL1-208ENST00000532056 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
KNL1-208ENST00000532056 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 ZNF827Q17R98 1081 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 HEG1Q9ULI3 1381 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
KNL1-208ENST00000532056 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
KNL1-208ENST00000532056 LINC00116Q8NCU8 138 aa13.17□□□□□ -0.3
KNL1-208ENST00000532056 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
KNL1-208ENST00000532056 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
KNL1-208ENST00000532056 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
KNL1-208ENST00000532056 KCNQ3O43525 872 aa13.16□□□□□ -0.3
KNL1-208ENST00000532056 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
KNL1-208ENST00000532056 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
KNL1-208ENST00000532056 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
KNL1-208ENST00000532056 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
KNL1-208ENST00000532056 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
KNL1-208ENST00000532056 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
KNL1-208ENST00000532056 NGEFQ8N5V2 710 aa13.15□□□□□ -0.3
KNL1-208ENST00000532056 TSPYL4Q9UJ04 414 aa13.15□□□□□ -0.3
KNL1-208ENST00000532056 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
KNL1-208ENST00000532056 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
KNL1-208ENST00000532056 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
KNL1-208ENST00000532056 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
KNL1-208ENST00000532056 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
KNL1-208ENST00000532056 AK7Q96M32 723 aa13.14□□□□□ -0.31
KNL1-208ENST00000532056 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
KNL1-208ENST00000532056 CHL1O00533 1208 aa13.13□□□□□ -0.31
KNL1-208ENST00000532056 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
KNL1-208ENST00000532056 GNAI1P63096 354 aa13.13□□□□□ -0.31
KNL1-208ENST00000532056 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
KNL1-208ENST00000532056 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
KNL1-208ENST00000532056 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
KNL1-208ENST00000532056 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
KNL1-208ENST00000532056 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
KNL1-208ENST00000532056 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
KNL1-208ENST00000532056 CYP19A1P11511 503 aaPredicted RBP13.12□□□□□ -0.31
KNL1-208ENST00000532056 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
KNL1-208ENST00000532056 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
KNL1-208ENST00000532056 IL16Q14005 1332 aa13.12□□□□□ -0.31
KNL1-208ENST00000532056 GNPATO15228 680 aa13.11□□□□□ -0.31
KNL1-208ENST00000532056 STARD3NLO95772 234 aa13.11□□□□□ -0.31
KNL1-208ENST00000532056 SSFA2P28290 1259 aa13.11□□□□□ -0.31
KNL1-208ENST00000532056 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
KNL1-208ENST00000532056 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
KNL1-208ENST00000532056 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms