RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 SIK1P57059 783 aa22.65■■□□□ 1.22
CAPRIN1-210ENST00000531668 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
CAPRIN1-210ENST00000531668 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
CAPRIN1-210ENST00000531668 SCN11AQ9UI33 1791 aa22.65■■□□□ 1.22
CAPRIN1-210ENST00000531668 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
CAPRIN1-210ENST00000531668 TEFQ10587 303 aa22.64■■□□□ 1.21
CAPRIN1-210ENST00000531668 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
CAPRIN1-210ENST00000531668 IL17REQ8NFR9 667 aa22.63■■□□□ 1.21
CAPRIN1-210ENST00000531668 PDGFDQ9GZP0 370 aaPredicted RBP22.63■■□□□ 1.21
CAPRIN1-210ENST00000531668 MSH5O43196 834 aa22.62■■□□□ 1.21
CAPRIN1-210ENST00000531668 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
CAPRIN1-210ENST00000531668 CCDC146Q8IYE0 955 aa22.62■■□□□ 1.21
CAPRIN1-210ENST00000531668 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
CAPRIN1-210ENST00000531668 MCM10Q7L590 875 aa22.61■■□□□ 1.21
CAPRIN1-210ENST00000531668 AKT1S1Q96B36 256 aa22.61■■□□□ 1.21
CAPRIN1-210ENST00000531668 DCTN1Q14203 1278 aa22.6■■□□□ 1.21
CAPRIN1-210ENST00000531668 PLEKHF1Q96S99 279 aa22.6■■□□□ 1.21
CAPRIN1-210ENST00000531668 ZBTB7AO95365 584 aa22.59■■□□□ 1.21
CAPRIN1-210ENST00000531668 AK7Q96M32 723 aa22.59■■□□□ 1.21
CAPRIN1-210ENST00000531668 PAPPAQ13219 1627 aa22.58■■□□□ 1.21
CAPRIN1-210ENST00000531668 ITPK1Q13572 414 aa22.58■■□□□ 1.21
CAPRIN1-210ENST00000531668 ADAMTS8Q9UP79 889 aa22.58■■□□□ 1.21
CAPRIN1-210ENST00000531668 HMGB2P26583 209 aaKnown RBP22.57■■□□□ 1.2
CAPRIN1-210ENST00000531668 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
CAPRIN1-210ENST00000531668 TTC5Q8N0Z6 440 aa22.57■■□□□ 1.2
CAPRIN1-210ENST00000531668 LINC00116Q8NCU8 138 aa22.57■■□□□ 1.2
CAPRIN1-210ENST00000531668 ATF5Q9Y2D1 282 aaPredicted RBP22.57■■□□□ 1.2
CAPRIN1-210ENST00000531668 C5P01031 1676 aa22.57■■□□□ 1.2
CAPRIN1-210ENST00000531668 PHF14O94880 888 aa22.56■■□□□ 1.2
CAPRIN1-210ENST00000531668 NEUROD2Q15784 382 aa22.56■■□□□ 1.2
CAPRIN1-210ENST00000531668 NFE2L2Q16236 605 aa22.56■■□□□ 1.2
CAPRIN1-210ENST00000531668 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
CAPRIN1-210ENST00000531668 SPON1Q9HCB6 807 aa22.55■■□□□ 1.2
CAPRIN1-210ENST00000531668 RRP7AQ9Y3A4 280 aaKnown RBP22.55■■□□□ 1.2
CAPRIN1-210ENST00000531668 PNPLA7Q6ZV29 1317 aa22.55■■□□□ 1.2
CAPRIN1-210ENST00000531668 SMIM5Q71RC9 77 aa22.54■■□□□ 1.2
CAPRIN1-210ENST00000531668 MRS2Q9HD23 443 aa22.54■■□□□ 1.2
CAPRIN1-210ENST00000531668 TAF1LQ8IZX4 1826 aa22.54■■□□□ 1.2
CAPRIN1-210ENST00000531668 MRC1P22897 1456 aa22.54■■□□□ 1.2
CAPRIN1-210ENST00000531668 BTBD11A6QL63 1104 aa22.53■■□□□ 1.2
CAPRIN1-210ENST00000531668 GNPATO15228 680 aa22.53■■□□□ 1.2
CAPRIN1-210ENST00000531668 RIPK4P57078 832 aa22.53■■□□□ 1.2
CAPRIN1-210ENST00000531668 HTATSF1O43719 755 aaKnown RBP22.52■■□□□ 1.2
CAPRIN1-210ENST00000531668 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
CAPRIN1-210ENST00000531668 THUMPD2Q9BTF0 503 aaKnown RBP22.52■■□□□ 1.2
CAPRIN1-210ENST00000531668 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
CAPRIN1-210ENST00000531668 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
CAPRIN1-210ENST00000531668 COL23A1Q86Y22 540 aaPredicted RBP22.51■■□□□ 1.19
CAPRIN1-210ENST00000531668 PPP1R1BQ9UD71 204 aaPredicted RBP22.51■■□□□ 1.19
CAPRIN1-210ENST00000531668 DLG5Q8TDM6 1919 aa22.51■■□□□ 1.19
CAPRIN1-210ENST00000531668 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
CAPRIN1-210ENST00000531668 DNAJC10Q8IXB1 793 aa22.5■■□□□ 1.19
CAPRIN1-210ENST00000531668 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
CAPRIN1-210ENST00000531668 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
CAPRIN1-210ENST00000531668 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
CAPRIN1-210ENST00000531668 MIS18AQ9NYP9 233 aa22.49■■□□□ 1.19
CAPRIN1-210ENST00000531668 TUBGCP6Q96RT7 1819 aa22.49■■□□□ 1.19
CAPRIN1-210ENST00000531668 KCNQ3O43525 872 aa22.48■■□□□ 1.19
CAPRIN1-210ENST00000531668 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
CAPRIN1-210ENST00000531668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.47■■□□□ 1.19
CAPRIN1-210ENST00000531668 MSL1Q68DK7 614 aa22.47■■□□□ 1.19
CAPRIN1-210ENST00000531668 AMIGO3Q86WK7 504 aa22.47■■□□□ 1.19
CAPRIN1-210ENST00000531668 FLAD1Q8NFF5 587 aa22.47■■□□□ 1.19
CAPRIN1-210ENST00000531668 ZNF496Q96IT1 587 aaPredicted RBP22.47■■□□□ 1.19
CAPRIN1-210ENST00000531668 RTCBQ9Y3I0 505 aaKnown RBP22.47■■□□□ 1.19
CAPRIN1-210ENST00000531668 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
CAPRIN1-210ENST00000531668 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
CAPRIN1-210ENST00000531668 TAF7Q15545 349 aaPredicted RBP22.46■■□□□ 1.19
CAPRIN1-210ENST00000531668 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
CAPRIN1-210ENST00000531668 FMNL2Q96PY5 1086 aa22.45■■□□□ 1.18
CAPRIN1-210ENST00000531668 SIPA1L3O60292 1781 aaPredicted RBP22.44■■□□□ 1.18
CAPRIN1-210ENST00000531668 LRP5O75197 1615 aa22.44■■□□□ 1.18
CAPRIN1-210ENST00000531668 LMOD3Q0VAK6 560 aa22.44■■□□□ 1.18
CAPRIN1-210ENST00000531668 KCPQ6ZWJ8 1503 aa22.44■■□□□ 1.18
CAPRIN1-210ENST00000531668 CNTNAP4Q9C0A0 1308 aa22.43■■□□□ 1.18
CAPRIN1-210ENST00000531668 APAF1O14727 1248 aa22.43■■□□□ 1.18
CAPRIN1-210ENST00000531668 SSFA2P28290 1259 aa22.43■■□□□ 1.18
CAPRIN1-210ENST00000531668 TRAPPC3LQ5T215 181 aa22.43■■□□□ 1.18
CAPRIN1-210ENST00000531668 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
CAPRIN1-210ENST00000531668 QSER1Q2KHR3 1735 aa22.43■■□□□ 1.18
CAPRIN1-210ENST00000531668 KLHL34Q8N239 644 aa22.42■■□□□ 1.18
CAPRIN1-210ENST00000531668 UBR3Q6ZT12 1888 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 HEG1Q9ULI3 1381 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 TJP1Q07157 1748 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 RPS6KA4O75676 772 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 CYP19A1P11511 503 aaPredicted RBP22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 POLD1P28340 1107 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 VSIG10Q8N0Z9 540 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 PNISRQ8TF01 805 aaKnown RBP22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 LAS1LQ9Y4W2 734 aaKnown RBP22.41■■□□□ 1.18
CAPRIN1-210ENST00000531668 COL5A3P25940 1745 aaPredicted RBP22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 ZNF831Q5JPB2 1677 aa22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 STARD3NLO95772 234 aa22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 CANXP27824 592 aaKnown RBP22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 PTGER2P43116 358 aa22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 FAM9BQ8IZU0 186 aa22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 ZNF330Q9Y3S2 320 aaPredicted RBP22.4■■□□□ 1.18
CAPRIN1-210ENST00000531668 RFC4P35249 363 aa22.39■■□□□ 1.17
CAPRIN1-210ENST00000531668 INTS5Q6P9B9 1019 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms