RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 SPG7Q9UQ90 795 aa11.77□□□□□ -0.52
PPFIA1-219ENST00000531657 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.52
PPFIA1-219ENST00000531657 DLC1Q96QB1 1528 aa11.77□□□□□ -0.53
PPFIA1-219ENST00000531657 SSFA2P28290 1259 aa11.77□□□□□ -0.53
PPFIA1-219ENST00000531657 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
PPFIA1-219ENST00000531657 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
PPFIA1-219ENST00000531657 CCDC8Q9H0W5 538 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-219ENST00000531657 NEK4P51957 841 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 ZGPATQ8N5A5 531 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 SRCIN1Q9C0H9 1055 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 CWC27Q6UX04 472 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 MPNDQ8N594 471 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 TOM1L2Q6ZVM7 507 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
PPFIA1-219ENST00000531657 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 SPATA31D1Q6ZQQ2 1576 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 PANK2Q9BZ23 570 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 LRRCC1Q9C099 1032 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 TTC21AQ8NDW8 1320 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 RTL1A6NKG5 1358 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 KCNJ4P48050 445 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 BMP2KLQ5H9B9 411 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 TTC22Q5TAA0 569 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 IP6K1Q92551 441 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
PPFIA1-219ENST00000531657 FOSBP53539 338 aa11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 EDC3Q96F86 508 aaKnown RBP11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 IGSF1Q8N6C5 1336 aa11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 AATKQ6ZMQ8 1374 aa11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 NAP1L2Q9ULW6 460 aaPredicted RBP11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
PPFIA1-219ENST00000531657 CHGBP05060 677 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 PDE1AP54750 535 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 MCTP1Q6DN14 999 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 GDPD2Q9HCC8 539 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 MYD88Q99836 296 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 PIK3R4Q99570 1358 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 MED14O60244 1454 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 KDM4AO75164 1064 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 EVA1CP58658 441 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 IL25Q9H293 177 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 PALD1Q9ULE6 856 aa11.73□□□□□ -0.53
PPFIA1-219ENST00000531657 MX1P20591 662 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 TTC5Q8N0Z6 440 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 DNAAF4Q8WXU2 420 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 OVOS2A0A0J9YW53 1432 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 OVOS2Q6IE36 1432 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 UTRNP46939 3433 aa11.72□□□□□ -0.53
PPFIA1-219ENST00000531657 TRAK2O60296 914 aa11.71□□□□□ -0.53
PPFIA1-219ENST00000531657 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.53
PPFIA1-219ENST00000531657 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
PPFIA1-219ENST00000531657 MCM4P33991 863 aa11.71□□□□□ -0.54
PPFIA1-219ENST00000531657 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.54
PPFIA1-219ENST00000531657 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.54
PPFIA1-219ENST00000531657 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 GNAI3P08754 354 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 AGLP35573 1532 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 ADAMTS2O95450 1211 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 AACSQ86V21 672 aa11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
PPFIA1-219ENST00000531657 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 UBE3BQ7Z3V4 1068 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 CRB1P82279 1406 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 NEURL4Q96JN8 1562 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 PTPRCP08575 1304 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 CABP4P57796 275 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 AAMPQ13685 434 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 TMEM94Q12767 1356 aa11.69□□□□□ -0.54
PPFIA1-219ENST00000531657 K7ELQ4 463 aaPredicted RBP11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 KCNH5Q8NCM2 988 aa11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 KIF2CQ99661 725 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms