RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
PCDHA8-202ENST00000531613 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
PCDHA8-202ENST00000531613 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
PCDHA8-202ENST00000531613 HMGN5P82970 282 aaKnown RBP20.49■□□□□ 0.87
PCDHA8-202ENST00000531613 DBF4Q9UBU7 674 aaPredicted RBP20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 ABCC5O15440 1437 aa20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 ADAMTS2O95450 1211 aa20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 USP5P45974 858 aa20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 MPHOSPH10O00566 681 aaKnown RBP20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 NUP62CLQ9H1M0 184 aa20.48■□□□□ 0.87
PCDHA8-202ENST00000531613 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
PCDHA8-202ENST00000531613 HYPKQ9NX55 129 aa20.47■□□□□ 0.87
PCDHA8-202ENST00000531613 PIBF1Q8WXW3 757 aa20.47■□□□□ 0.87
PCDHA8-202ENST00000531613 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
PCDHA8-202ENST00000531613 NOM1Q5C9Z4 860 aaKnown RBP20.47■□□□□ 0.87
PCDHA8-202ENST00000531613 CEP131Q9UPN4 1083 aa20.47■□□□□ 0.87
PCDHA8-202ENST00000531613 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 DDX11Q96FC9 970 aa20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 NAPBQ9H115 298 aa20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 KIF14Q15058 1648 aa20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 POLR3DP05423 398 aaPredicted RBP20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 MAP3K12Q12852 859 aa20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 MKNK2Q9HBH9 465 aa20.46■□□□□ 0.87
PCDHA8-202ENST00000531613 MINDY4BA8MYZ0 360 aa20.45■□□□□ 0.86
PCDHA8-202ENST00000531613 ERLIN2O94905 339 aa20.45■□□□□ 0.86
PCDHA8-202ENST00000531613 CRACR2BQ8N4Y2 399 aaPredicted RBP20.45■□□□□ 0.86
PCDHA8-202ENST00000531613 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
PCDHA8-202ENST00000531613 ANKIB1Q9P2G1 1089 aa20.45■□□□□ 0.86
PCDHA8-202ENST00000531613 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
PCDHA8-202ENST00000531613 TTC21BQ7Z4L5 1316 aa20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 CCDC196A0A1B0GTZ2 297 aa20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 EXOC5O00471 708 aa20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 DZIP1Q86YF9 867 aaKnown RBP20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 SEC63Q9UGP8 760 aaKnown RBP20.44■□□□□ 0.86
PCDHA8-202ENST00000531613 F6X3S4 739 aa20.43■□□□□ 0.86
PCDHA8-202ENST00000531613 SMARCA5O60264 1052 aaPredicted RBP20.43■□□□□ 0.86
PCDHA8-202ENST00000531613 SLC5A1P13866 664 aa20.43■□□□□ 0.86
PCDHA8-202ENST00000531613 NGLY1Q96IV0 654 aa20.43■□□□□ 0.86
PCDHA8-202ENST00000531613 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
PCDHA8-202ENST00000531613 CCDC181Q5TID7 509 aa20.43■□□□□ 0.86
PCDHA8-202ENST00000531613 A0A087WZG4 1122 aa20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 ANKRD18BA2A2Z9 1011 aa20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 FAM135AQ9P2D6 1515 aa20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 MAP7D2Q96T17 732 aa20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 KRT28Q7Z3Y7 464 aa20.42■□□□□ 0.86
PCDHA8-202ENST00000531613 LRRFIP2Q9Y608 721 aaKnown RBP20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 CTCFLQ8NI51 663 aaPredicted RBP20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 DENND4BO75064 1496 aaPredicted RBP20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 SMTNL1A8MU46 457 aa20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 TEX13AQ9BXU3 409 aaPredicted RBP20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 NSD2O96028 1365 aa20.41■□□□□ 0.86
PCDHA8-202ENST00000531613 MCM4P33991 863 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 CCDC8Q9H0W5 538 aaPredicted RBP20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 HMGB1P09429 215 aaKnown RBP20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 FLIIQ13045 1269 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 IFNL2Q8IZJ0 200 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 PTPRCP08575 1304 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 PTPN23Q9H3S7 1636 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 FERMT3Q86UX7 667 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 IQCA1Q86XH1 822 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 SKIDA1Q1XH10 827 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 NCOA1Q15788 1441 aa20.4■□□□□ 0.86
PCDHA8-202ENST00000531613 AXDND1Q5T1B0 1012 aaPredicted RBP20.39■□□□□ 0.86
PCDHA8-202ENST00000531613 RPGRQ92834 1020 aaKnown RBP20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 GRPEL1Q9HAV7 217 aa20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 SH2B1Q9NRF2 756 aaPredicted RBP20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 NOS1P29475 1434 aa20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 CUL7Q14999 1698 aa20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 TNIP1Q15025 636 aa20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 RNF41Q9H4P4 317 aaPredicted RBP20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.85
PCDHA8-202ENST00000531613 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 SLF2Q8IX21 1173 aa20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 ZNF444Q8N0Y2 327 aaPredicted RBP20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 CCDC112Q8NEF3 446 aa20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 SEPT11Q9NVA2 429 aaKnown RBP20.38■□□□□ 0.85
PCDHA8-202ENST00000531613 NEFHP12036 1026 aa20.37■□□□□ 0.85
PCDHA8-202ENST00000531613 CADPS2Q86UW7 1296 aa20.37■□□□□ 0.85
PCDHA8-202ENST00000531613 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
PCDHA8-202ENST00000531613 ZNF213O14771 459 aa20.37■□□□□ 0.85
PCDHA8-202ENST00000531613 FILIP1Q7Z7B0 1213 aa20.37■□□□□ 0.85
PCDHA8-202ENST00000531613 RANBP6O60518 1105 aaKnown RBP20.37■□□□□ 0.85
PCDHA8-202ENST00000531613 H0YHG0 523 aa20.36■□□□□ 0.85
PCDHA8-202ENST00000531613 MATR3P43243 847 aaKnown RBP eCLIP20.36■□□□□ 0.85
PCDHA8-202ENST00000531613 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
PCDHA8-202ENST00000531613 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
PCDHA8-202ENST00000531613 GPTP24298 496 aa20.36■□□□□ 0.85
PCDHA8-202ENST00000531613 SCAND2PQ9GZW5 306 aaPredicted RBP20.36■□□□□ 0.85
PCDHA8-202ENST00000531613 GOLGA6L10A6NI86 522 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms