RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 DNAAF2Q9NVR5 837 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 PTMSP20962 102 aa6.41□□□□□ -1.38
ECHDC1-221ENST00000531582 SRPK2P78362 688 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-221ENST00000531582 OGFOD1Q8N543 542 aa6.41□□□□□ -1.38
ECHDC1-221ENST00000531582 OSBPL3Q9H4L5 887 aa6.41□□□□□ -1.38
ECHDC1-221ENST00000531582 WASLO00401 505 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 BACH1O14867 736 aa6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 AXIN1O15169 862 aa6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 PPM1GO15355 546 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 HSP90AA2PQ14568 343 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 SIX5Q8N196 739 aa6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 MEIOBQ8N635 442 aa6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 USP35Q9P2H5 1018 aa6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 PCDHGA11Q9Y5H2 935 aa6.4□□□□□ -1.38
ECHDC1-221ENST00000531582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 M0R2N6 131 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 ADD1P35611 737 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 PTGIRP43119 386 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 SCTRP47872 440 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 PSME1Q06323 249 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 SCARF1Q14162 830 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 FAM43AQ8N2R8 423 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 WASHC2CQ9Y4E1 1318 aa6.39□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L15C9J2P7 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L10C9JJH3 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L13C9JLJ4 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L12C9JPN9 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L11C9JVI0 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L21D6R901 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L18D6R9N7 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L22D6RA61 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L17D6RBQ6 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L19D6RCP7 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L20D6RJB6 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 CLGNO14967 610 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 CSB-PGBD3P0DP91 1061 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 USP17L24Q0WX57 530 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 PTK7Q13308 1070 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 CCDC102BQ68D86 513 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 FAM200AQ8TCP9 573 aa6.38□□□□□ -1.39
ECHDC1-221ENST00000531582 ZBTB7BO15156 539 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 GTF2E1P29083 439 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 GPC1P35052 558 aa6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 SEC13P55735 322 aa6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 CBLBQ13191 982 aa6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 MRPL14Q6P1L8 145 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 ANKMY2Q8IV38 441 aa6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 NLRP3Q96P20 1036 aa6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 PSMD1Q99460 953 aa6.37□□□□□ -1.39
ECHDC1-221ENST00000531582 INHAP05111 366 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 ANP32AP39687 249 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 GDF10P55107 478 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 CLDN10P78369 228 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 CLN3Q13286 438 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 SECISBP2LQ93073 1101 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 PLCD4Q9BRC7 762 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 ESYT1Q9BSJ8 1104 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 PRDM4Q9UKN5 801 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 NOVA2Q9UNW9 492 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 USTQ9Y2C2 406 aa6.36□□□□□ -1.39
ECHDC1-221ENST00000531582 SPINT1O43278 529 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 IGSF3O75054 1194 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 RELBQ01201 579 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 DPYDQ12882 1025 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 SWI5Q1ZZU3 235 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 CDCA8Q53HL2 280 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 AXDND1Q5T1B0 1012 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 TPCN2Q8NHX9 752 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 SLC4A9Q96Q91 983 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 SENP2Q9HC62 589 aa6.35□□□□□ -1.39
ECHDC1-221ENST00000531582 WASHC2AQ641Q2 1341 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 A0A1W2PRU2 124 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 BMP2P12643 396 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 NBPF15Q8N660 670 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 GAS2L2Q8NHY3 880 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 CNKSR1Q969H4 720 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 ZNF622Q969S3 477 aaKnown RBP eCLIP6.34□□□□□ -1.391e-7■□□□□ 9.8
ECHDC1-221ENST00000531582 KIFC2Q96AC6 838 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 ZNF594Q96JF6 807 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 CHMP4BQ9H444 224 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 ARHGEF10LQ9HCE6 1279 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 AAASQ9NRG9 546 aa6.34□□□□□ -1.39
ECHDC1-221ENST00000531582 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 MEN1O00255 615 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 MMP14P50281 582 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 RNF144AP50876 292 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 B4GALNT3Q6L9W6 998 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 Q6ZNB5 142 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 CNPY4Q8N129 248 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 ETNK1Q9HBU6 452 aa6.33□□□□□ -1.4
ECHDC1-221ENST00000531582 DKK1O94907 266 aa6.32□□□□□ -1.4
ECHDC1-221ENST00000531582 SCNN1DP51172 638 aa6.32□□□□□ -1.4
ECHDC1-221ENST00000531582 SMTNP53814 917 aa6.32□□□□□ -1.4
ECHDC1-221ENST00000531582 KDF1Q8NAX2 398 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-221ENST00000531582 AGBL1Q96MI9 1066 aa6.32□□□□□ -1.4
ECHDC1-221ENST00000531582 ZNF358Q9NW07 568 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms