RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 TNS4Q8IZW8 715 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 DNAJC5GQ8N7S2 189 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 PUS7Q96PZ0 661 aaKnown RBP10.84□□□□□ -0.67
SNX7-204ENST00000528824 NSD2O96028 1365 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 PALLDQ8WX93 1383 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 TUBGCP6Q96RT7 1819 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 HOXC9P31274 260 aa10.83□□□□□ -0.68
SNX7-204ENST00000528824 MPRIPQ6WCQ1 1025 aa10.83□□□□□ -0.68
SNX7-204ENST00000528824 L3MBTL2Q969R5 705 aa10.83□□□□□ -0.68
SNX7-204ENST00000528824 KLRG1Q96E93 195 aa10.83□□□□□ -0.68
SNX7-204ENST00000528824 DOT1LQ8TEK3 1739 aa10.83□□□□□ -0.68
SNX7-204ENST00000528824 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
SNX7-204ENST00000528824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
SNX7-204ENST00000528824 PHF14O94880 888 aa10.82□□□□□ -0.68
SNX7-204ENST00000528824 PRELPP51888 382 aa10.82□□□□□ -0.68
SNX7-204ENST00000528824 PLEKHG2Q9H7P9 1386 aa10.82□□□□□ -0.68
SNX7-204ENST00000528824 ARHGAP27Q6ZUM4 889 aa10.82□□□□□ -0.68
SNX7-204ENST00000528824 JMYQ8N9B5 988 aa10.82□□□□□ -0.68
SNX7-204ENST00000528824 CEP350Q5VT06 3117 aa10.81□□□□□ -0.68
SNX7-204ENST00000528824 RTL1A6NKG5 1358 aa10.81□□□□□ -0.68
SNX7-204ENST00000528824 C5P01031 1676 aa10.81□□□□□ -0.68
SNX7-204ENST00000528824 NLGN1Q8N2Q7 840 aa10.81□□□□□ -0.68
SNX7-204ENST00000528824 SLC12A5Q9H2X9 1139 aa10.81□□□□□ -0.68
SNX7-204ENST00000528824 BCS1LQ9Y276 419 aa10.81□□□□□ -0.68
SNX7-204ENST00000528824 MAP3K19Q56UN5 1328 aa10.8□□□□□ -0.68
SNX7-204ENST00000528824 CCDC87Q9NVE4 849 aa10.8□□□□□ -0.68
SNX7-204ENST00000528824 WWC3Q9ULE0 1092 aa10.8□□□□□ -0.68
SNX7-204ENST00000528824 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
SNX7-204ENST00000528824 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
SNX7-204ENST00000528824 CARD11Q9BXL7 1154 aa10.79□□□□□ -0.68
SNX7-204ENST00000528824 FCHSD2O94868 740 aa10.78□□□□□ -0.68
SNX7-204ENST00000528824 A0A1W2PP64 1363 aa10.78□□□□□ -0.68
SNX7-204ENST00000528824 MEGF6O75095 1541 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 MMP10P09238 476 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 NBPF6Q5VWK0 638 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 NBPF4Q96M43 638 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 SPG7Q9UQ90 795 aa10.77□□□□□ -0.68
SNX7-204ENST00000528824 CICQ96RK0 1608 aaPredicted RBP10.77□□□□□ -0.68
SNX7-204ENST00000528824 CD163L1Q9NR16 1453 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 LOC102724428A0A0B4J2F2 783 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 GNPATO15228 680 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 SIK1P57059 783 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 TMF1P82094 1093 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 NMRK2Q9NPI5 230 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
SNX7-204ENST00000528824 PARP3Q9Y6F1 533 aa10.77□□□□□ -0.69
SNX7-204ENST00000528824 GOLGB1Q14789 3259 aaKnown RBP10.77□□□□□ -0.69
SNX7-204ENST00000528824 C4BP0C0L5 1744 aa10.76□□□□□ -0.69
SNX7-204ENST00000528824 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
SNX7-204ENST00000528824 TMOD3Q9NYL9 352 aa10.76□□□□□ -0.69
SNX7-204ENST00000528824 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
SNX7-204ENST00000528824 KIF24Q5T7B8 1368 aa10.76□□□□□ -0.69
SNX7-204ENST00000528824 WDR90Q96KV7 1748 aa10.75□□□□□ -0.69
SNX7-204ENST00000528824 C9orf131Q5VYM1 1079 aa10.75□□□□□ -0.69
SNX7-204ENST00000528824 PIM2Q9P1W9 311 aa10.75□□□□□ -0.69
SNX7-204ENST00000528824 A0A0G2JLW4 131 aa10.74□□□□□ -0.69
SNX7-204ENST00000528824 RFC4P35249 363 aa10.74□□□□□ -0.69
SNX7-204ENST00000528824 PIGBQ92521 554 aa10.74□□□□□ -0.69
SNX7-204ENST00000528824 INSRP06213 1382 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 NEUROD1Q13562 356 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 DALRD3Q5D0E6 543 aaKnown RBP10.73□□□□□ -0.69
SNX7-204ENST00000528824 C10orf71Q711Q0 1435 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 TAF1LQ8IZX4 1826 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 USHBP1Q8N6Y0 703 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 ZC3H4Q9UPT8 1303 aaKnown RBP10.73□□□□□ -0.69
SNX7-204ENST00000528824 PXDNLA1KZ92 1463 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 FLT4P35916 1363 aa10.73□□□□□ -0.69
SNX7-204ENST00000528824 RRS1Q15050 365 aaKnown RBP10.73□□□□□ -0.69
SNX7-204ENST00000528824 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
SNX7-204ENST00000528824 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
SNX7-204ENST00000528824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.73□□□□□ -0.69
SNX7-204ENST00000528824 CYP27B1O15528 508 aa10.72□□□□□ -0.69
SNX7-204ENST00000528824 NUBP1P53384 320 aa10.72□□□□□ -0.69
SNX7-204ENST00000528824 LINC00116Q8NCU8 138 aa10.72□□□□□ -0.69
SNX7-204ENST00000528824 RRAGCQ9HB90 399 aa10.72□□□□□ -0.69
SNX7-204ENST00000528824 RNF181Q9P0P0 153 aa10.72□□□□□ -0.69
SNX7-204ENST00000528824 DPEP1P16444 411 aa10.71□□□□□ -0.69
SNX7-204ENST00000528824 RC3H1Q5TC82 1133 aaKnown RBP10.71□□□□□ -0.69
SNX7-204ENST00000528824 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
SNX7-204ENST00000528824 IFNL2Q8IZJ0 200 aa10.71□□□□□ -0.69
SNX7-204ENST00000528824 UBR3Q6ZT12 1888 aa10.71□□□□□ -0.7
SNX7-204ENST00000528824 HSP90AB1P08238 724 aaKnown RBP10.7□□□□□ -0.7
SNX7-204ENST00000528824 HSPA1AP0DMV8 641 aaKnown RBP10.7□□□□□ -0.7
SNX7-204ENST00000528824 HSPA1BP0DMV9 641 aaKnown RBP10.7□□□□□ -0.7
SNX7-204ENST00000528824 VEGFAP15692 232 aaPredicted RBP10.7□□□□□ -0.7
SNX7-204ENST00000528824 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
SNX7-204ENST00000528824 HTRA3P83110 453 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 HSP90AB2PQ58FF8 381 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 AMIGO3Q86WK7 504 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 SIN3AQ96ST3 1273 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
SNX7-204ENST00000528824 KIF13BQ9NQT8 1826 aa10.68□□□□□ -0.7
SNX7-204ENST00000528824 FYB1O15117 783 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms