RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 XPCQ01831 940 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-219ENST00000528621 SH2B1Q9NRF2 756 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-219ENST00000528621 CCDC66A2RUB6 948 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 ERLIN1O75477 346 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 MX1P20591 662 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-219ENST00000528621 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-219ENST00000528621 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
CTNND1-219ENST00000528621 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 GRPEL1Q9HAV7 217 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 IL1RAPL2Q9NP60 686 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 DUOX2Q9NRD8 1548 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 IL16Q14005 1332 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 ZNF76P36508 570 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 SKIDA1Q1XH10 827 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 MYD88Q99836 296 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 HYPKQ9NX55 129 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 BICRAQ9NZM4 1560 aa9.96□□□□□ -0.81
CTNND1-219ENST00000528621 RALGAPBQ86X10 1494 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
CTNND1-219ENST00000528621 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 MCM10Q7L590 875 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 GOLGA6L10A6NI86 522 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 ZSCAN29Q8IWY8 852 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-219ENST00000528621 DNAI2Q9GZS0 605 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 CTTNBP2Q8WZ74 1663 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 PLB1Q6P1J6 1458 aa9.96□□□□□ -0.82
CTNND1-219ENST00000528621 DESP17661 470 aa9.95□□□□□ -0.82
CTNND1-219ENST00000528621 ZRSR2Q15696 482 aaKnown RBP9.95□□□□□ -0.82
CTNND1-219ENST00000528621 CAVIN4Q5BKX8 364 aa9.95□□□□□ -0.82
CTNND1-219ENST00000528621 NUP160Q12769 1436 aa9.95□□□□□ -0.82
CTNND1-219ENST00000528621 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
CTNND1-219ENST00000528621 LEKR1Q6ZMV7 388 aa9.95□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
CTNND1-219ENST00000528621 EIF3JO75822 258 aaKnown RBP9.95□□□□□ -0.82
CTNND1-219ENST00000528621 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■■■■□ 22.1
CTNND1-219ENST00000528621 MIS18AQ9NYP9 233 aa9.95□□□□□ -0.82
CTNND1-219ENST00000528621 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 FANCAO15360 1455 aa9.94□□□□□ -0.82
CTNND1-219ENST00000528621 WASLO00401 505 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC191Q8NCU4 936 aa9.94□□□□□ -0.82
CTNND1-219ENST00000528621 KIF2AO00139 706 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 ZPR1O75312 459 aa9.94□□□□□ -0.82
CTNND1-219ENST00000528621 ZC3H6P61129 1189 aaKnown RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 WAPLQ7Z5K2 1190 aa9.94□□□□□ -0.82
CTNND1-219ENST00000528621 SLF2Q8IX21 1173 aa9.94□□□□□ -0.82
CTNND1-219ENST00000528621 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 IFIT1P09914 478 aaKnown RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 USP5P45974 858 aa9.94□□□□□ -0.82
CTNND1-219ENST00000528621 ZNF397Q8NF99 534 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
CTNND1-219ENST00000528621 SLC5A1P13866 664 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 TNIP1Q15025 636 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 MAP3K11Q16584 847 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 AXDND1Q5T1B0 1012 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-219ENST00000528621 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 H0YHG0 523 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC112Q8NEF3 446 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 SEPT11Q9NVA2 429 aaKnown RBP9.93□□□□□ -0.82
CTNND1-219ENST00000528621 BRPF3Q9ULD4 1205 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 TRIM21P19474 475 aaKnown RBP9.93□□□□□ -0.82
CTNND1-219ENST00000528621 CTAGE5O15320 804 aa9.93□□□□□ -0.82
CTNND1-219ENST00000528621 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-219ENST00000528621 MCM4P33991 863 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 TTF1Q15361 905 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 NOS1P29475 1434 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 SEPT7Q16181 437 aaKnown RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 JAKMIP3Q5VZ66 844 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 EHMT1Q9H9B1 1298 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 SSBP05455 408 aaKnown RBP eCLIP9.92□□□□□ -0.821e-7■■■■■ 26.8
CTNND1-219ENST00000528621 NME9Q86XW9 330 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 SCAND2PQ9GZW5 306 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 UGGT2Q9NYU1 1516 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC184Q52MB2 194 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-219ENST00000528621 TSG101Q99816 390 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 EXOC6BQ9Y2D4 811 aa9.92□□□□□ -0.82
CTNND1-219ENST00000528621 PPP1R12BO60237 982 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 FGFR1OPO95684 399 aaKnown RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC183Q5T5S1 534 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 CCDC148Q8NFR7 591 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 TEX14Q8IWB6 1497 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 POTEJP0CG39 1038 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 MAP3K12Q12852 859 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 DNAAF4Q8WXU2 420 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 PIBF1Q8WXW3 757 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 EVI5LQ96CN4 794 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 PYM1Q9BRP8 204 aaKnown RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 URB2Q14146 1524 aaKnown RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 PHF8Q9UPP1 1060 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms