RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 KCNQ4P56696 695 aa16.16■□□□□ 0.18
SDHD-205ENST00000528048 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
SDHD-205ENST00000528048 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SDHD-205ENST00000528048 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
SDHD-205ENST00000528048 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
SDHD-205ENST00000528048 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
SDHD-205ENST00000528048 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
SDHD-205ENST00000528048 FCHSD2O94868 740 aa16.15■□□□□ 0.18
SDHD-205ENST00000528048 TNS1Q9HBL0 1735 aaKnown RBP16.15■□□□□ 0.18
SDHD-205ENST00000528048 SPON1Q9HCB6 807 aa16.15■□□□□ 0.18
SDHD-205ENST00000528048 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
SDHD-205ENST00000528048 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
SDHD-205ENST00000528048 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
SDHD-205ENST00000528048 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
SDHD-205ENST00000528048 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
SDHD-205ENST00000528048 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
SDHD-205ENST00000528048 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
SDHD-205ENST00000528048 SIK1P57059 783 aa16.12■□□□□ 0.17
SDHD-205ENST00000528048 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
SDHD-205ENST00000528048 RGPD2P0DJD1 1756 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
SDHD-205ENST00000528048 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
SDHD-205ENST00000528048 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
SDHD-205ENST00000528048 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
SDHD-205ENST00000528048 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
SDHD-205ENST00000528048 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
SDHD-205ENST00000528048 AK7Q96M32 723 aa16.1■□□□□ 0.17
SDHD-205ENST00000528048 TEFQ10587 303 aa16.09■□□□□ 0.17
SDHD-205ENST00000528048 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
SDHD-205ENST00000528048 SLC16A10Q8TF71 515 aa16.09■□□□□ 0.17
SDHD-205ENST00000528048 PHACTR3Q96KR7 559 aa16.09■□□□□ 0.17
SDHD-205ENST00000528048 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
SDHD-205ENST00000528048 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
SDHD-205ENST00000528048 PDGFDQ9GZP0 370 aaPredicted RBP16.08■□□□□ 0.16
SDHD-205ENST00000528048 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
SDHD-205ENST00000528048 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
SDHD-205ENST00000528048 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
SDHD-205ENST00000528048 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
SDHD-205ENST00000528048 PRKRIP1Q9H875 184 aaPredicted RBP16.06■□□□□ 0.16
SDHD-205ENST00000528048 MAP3K5Q99683 1374 aa16.05■□□□□ 0.16
SDHD-205ENST00000528048 MAPK8IP3Q9UPT6 1336 aa16.05■□□□□ 0.16
SDHD-205ENST00000528048 WDR43Q15061 677 aaKnown RBP eCLIP16.05■□□□□ 0.16
SDHD-205ENST00000528048 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
SDHD-205ENST00000528048 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
SDHD-205ENST00000528048 SBF2Q86WG5 1849 aa16.05■□□□□ 0.16
SDHD-205ENST00000528048 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
SDHD-205ENST00000528048 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
SDHD-205ENST00000528048 POLD1P28340 1107 aa16.04■□□□□ 0.16
SDHD-205ENST00000528048 ITPK1Q13572 414 aa16.04■□□□□ 0.16
SDHD-205ENST00000528048 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
SDHD-205ENST00000528048 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
SDHD-205ENST00000528048 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
SDHD-205ENST00000528048 GNPATO15228 680 aa16.02■□□□□ 0.16
SDHD-205ENST00000528048 PHF14O94880 888 aa16.02■□□□□ 0.16
SDHD-205ENST00000528048 SLC39A6Q13433 755 aa16.02■□□□□ 0.16
SDHD-205ENST00000528048 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.16
SDHD-205ENST00000528048 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
SDHD-205ENST00000528048 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.15
SDHD-205ENST00000528048 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.15
SDHD-205ENST00000528048 RREB1Q92766 1687 aa16.02■□□□□ 0.15
SDHD-205ENST00000528048 BTAF1O14981 1849 aa16.01■□□□□ 0.15
SDHD-205ENST00000528048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
SDHD-205ENST00000528048 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
SDHD-205ENST00000528048 ANP32CO43423 234 aa16.01■□□□□ 0.15
SDHD-205ENST00000528048 SSFA2P28290 1259 aa16.01■□□□□ 0.15
SDHD-205ENST00000528048 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
SDHD-205ENST00000528048 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
SDHD-205ENST00000528048 NUP188Q5SRE5 1749 aa16■□□□□ 0.15
SDHD-205ENST00000528048 DOT1LQ8TEK3 1739 aa16■□□□□ 0.15
SDHD-205ENST00000528048 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
SDHD-205ENST00000528048 PTGER2P43116 358 aa16■□□□□ 0.15
SDHD-205ENST00000528048 NFE2L2Q16236 605 aa16■□□□□ 0.15
SDHD-205ENST00000528048 SLC4A9Q96Q91 983 aa16■□□□□ 0.15
SDHD-205ENST00000528048 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
SDHD-205ENST00000528048 MCM10Q7L590 875 aa15.99■□□□□ 0.15
SDHD-205ENST00000528048 ARXQ96QS3 562 aa15.99■□□□□ 0.15
SDHD-205ENST00000528048 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
SDHD-205ENST00000528048 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
SDHD-205ENST00000528048 STARD3NLO95772 234 aa15.98■□□□□ 0.15
SDHD-205ENST00000528048 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
SDHD-205ENST00000528048 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
SDHD-205ENST00000528048 TEX13AQ9BXU3 409 aaPredicted RBP15.98■□□□□ 0.15
SDHD-205ENST00000528048 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
SDHD-205ENST00000528048 RFC4P35249 363 aa15.97■□□□□ 0.15
SDHD-205ENST00000528048 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
SDHD-205ENST00000528048 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
SDHD-205ENST00000528048 DNAJC10Q8IXB1 793 aa15.97■□□□□ 0.15
SDHD-205ENST00000528048 FMNL2Q96PY5 1086 aa15.97■□□□□ 0.15
SDHD-205ENST00000528048 CNTNAP4Q9C0A0 1308 aa15.96■□□□□ 0.15
SDHD-205ENST00000528048 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
SDHD-205ENST00000528048 RIPK4P57078 832 aa15.96■□□□□ 0.15
SDHD-205ENST00000528048 MSL1Q68DK7 614 aa15.96■□□□□ 0.15
SDHD-205ENST00000528048 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.15
SDHD-205ENST00000528048 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
SDHD-205ENST00000528048 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms