RNA–Protein interactions for RNA: ENST00000527742.1

GLI1-202, Transcript of GLI family zinc finger 1, humanhuman

TSL 3

Gene GLI1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-202ENST00000527742 USP54Q70EL1 1684 aa13.82□□□□□ -0.2
GLI1-202ENST00000527742 MSH5O43196 834 aa13.81□□□□□ -0.2
GLI1-202ENST00000527742 FBLN1P23142 703 aa13.81□□□□□ -0.2
GLI1-202ENST00000527742 ERBB3P21860 1342 aa13.81□□□□□ -0.2
GLI1-202ENST00000527742 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
GLI1-202ENST00000527742 SOX12O15370 315 aa13.8□□□□□ -0.2
GLI1-202ENST00000527742 HTRA3P83110 453 aa13.8□□□□□ -0.2
GLI1-202ENST00000527742 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
GLI1-202ENST00000527742 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
GLI1-202ENST00000527742 ZNF521Q96K83 1311 aa13.8□□□□□ -0.2
GLI1-202ENST00000527742 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
GLI1-202ENST00000527742 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
GLI1-202ENST00000527742 IRX6P78412 446 aaPredicted RBP13.79□□□□□ -0.2
GLI1-202ENST00000527742 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
GLI1-202ENST00000527742 RBM46Q8TBY0 533 aaKnown RBP13.79□□□□□ -0.2
GLI1-202ENST00000527742 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
GLI1-202ENST00000527742 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
GLI1-202ENST00000527742 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
GLI1-202ENST00000527742 SLFN5Q08AF3 891 aa13.78□□□□□ -0.2
GLI1-202ENST00000527742 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
GLI1-202ENST00000527742 CCNL1Q9UK58 526 aaPredicted RBP13.78□□□□□ -0.2
GLI1-202ENST00000527742 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
GLI1-202ENST00000527742 DOT1LQ8TEK3 1739 aa13.77□□□□□ -0.21
GLI1-202ENST00000527742 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
GLI1-202ENST00000527742 WWC3Q9ULE0 1092 aa13.77□□□□□ -0.21
GLI1-202ENST00000527742 PPM1GO15355 546 aaPredicted RBP13.76□□□□□ -0.21
GLI1-202ENST00000527742 FCHSD2O94868 740 aa13.76□□□□□ -0.21
GLI1-202ENST00000527742 FSTL1Q12841 308 aa13.76□□□□□ -0.21
GLI1-202ENST00000527742 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
GLI1-202ENST00000527742 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
GLI1-202ENST00000527742 DUSP27Q5VZP5 1158 aa13.75□□□□□ -0.21
GLI1-202ENST00000527742 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
GLI1-202ENST00000527742 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
GLI1-202ENST00000527742 SYTL4Q96C24 671 aaPredicted RBP13.75□□□□□ -0.21
GLI1-202ENST00000527742 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
GLI1-202ENST00000527742 PCDH10Q9P2E7 1040 aa13.75□□□□□ -0.21
GLI1-202ENST00000527742 C5P01031 1676 aa13.75□□□□□ -0.21
GLI1-202ENST00000527742 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
GLI1-202ENST00000527742 LTN1O94822 1766 aa13.73□□□□□ -0.21
GLI1-202ENST00000527742 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
GLI1-202ENST00000527742 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
GLI1-202ENST00000527742 TAF1LQ8IZX4 1826 aa13.73□□□□□ -0.21
GLI1-202ENST00000527742 CALD1Q05682 793 aaKnown RBP13.72□□□□□ -0.21
GLI1-202ENST00000527742 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
GLI1-202ENST00000527742 IP6K1Q92551 441 aa13.72□□□□□ -0.21
GLI1-202ENST00000527742 COL3A1P02461 1466 aaPredicted RBP13.72□□□□□ -0.21
GLI1-202ENST00000527742 HSPA1AP0DMV8 641 aaKnown RBP13.71□□□□□ -0.21
GLI1-202ENST00000527742 HSPA1BP0DMV9 641 aaKnown RBP13.71□□□□□ -0.21
GLI1-202ENST00000527742 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.21
GLI1-202ENST00000527742 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
GLI1-202ENST00000527742 HMGB2P26583 209 aaKnown RBP13.7□□□□□ -0.22
GLI1-202ENST00000527742 HOXC9P31274 260 aa13.7□□□□□ -0.22
GLI1-202ENST00000527742 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
GLI1-202ENST00000527742 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
GLI1-202ENST00000527742 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
GLI1-202ENST00000527742 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
GLI1-202ENST00000527742 IL16Q14005 1332 aa13.69□□□□□ -0.22
GLI1-202ENST00000527742 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
GLI1-202ENST00000527742 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
GLI1-202ENST00000527742 LMOD3Q0VAK6 560 aa13.69□□□□□ -0.22
GLI1-202ENST00000527742 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
GLI1-202ENST00000527742 RRP7AQ9Y3A4 280 aaKnown RBP13.69□□□□□ -0.22
GLI1-202ENST00000527742 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
GLI1-202ENST00000527742 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
GLI1-202ENST00000527742 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
GLI1-202ENST00000527742 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 IL13P35225 146 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 RIPK4P57078 832 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
GLI1-202ENST00000527742 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
GLI1-202ENST00000527742 AMPHP49418 695 aa13.66□□□□□ -0.22
GLI1-202ENST00000527742 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
GLI1-202ENST00000527742 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
GLI1-202ENST00000527742 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
GLI1-202ENST00000527742 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
GLI1-202ENST00000527742 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
GLI1-202ENST00000527742 RTL1A6NKG5 1358 aa13.65□□□□□ -0.22
GLI1-202ENST00000527742 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
GLI1-202ENST00000527742 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
GLI1-202ENST00000527742 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
GLI1-202ENST00000527742 TGFB2P61812 414 aa13.64□□□□□ -0.23
GLI1-202ENST00000527742 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
GLI1-202ENST00000527742 ARHGAP27Q6ZUM4 889 aa13.64□□□□□ -0.23
GLI1-202ENST00000527742 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
GLI1-202ENST00000527742 BCS1LQ9Y276 419 aa13.64□□□□□ -0.23
GLI1-202ENST00000527742 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
GLI1-202ENST00000527742 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
GLI1-202ENST00000527742 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
GLI1-202ENST00000527742 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
GLI1-202ENST00000527742 MS4A1P11836 297 aa13.63□□□□□ -0.23
GLI1-202ENST00000527742 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
GLI1-202ENST00000527742 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
GLI1-202ENST00000527742 AK7Q96M32 723 aa13.63□□□□□ -0.23
GLI1-202ENST00000527742 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
GLI1-202ENST00000527742 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
GLI1-202ENST00000527742 FLT4P35916 1363 aa13.62□□□□□ -0.23
GLI1-202ENST00000527742 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms