RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
NEDD8-205ENST00000527046 PLSCR1O15162 318 aa14.22□□□□□ -0.13
NEDD8-205ENST00000527046 KCNQ3O43525 872 aa14.22□□□□□ -0.13
NEDD8-205ENST00000527046 CABP4P57796 275 aa14.22□□□□□ -0.13
NEDD8-205ENST00000527046 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
NEDD8-205ENST00000527046 APBA3O96018 575 aa14.21□□□□□ -0.13
NEDD8-205ENST00000527046 EN1Q05925 392 aaPredicted RBP14.21□□□□□ -0.13
NEDD8-205ENST00000527046 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
NEDD8-205ENST00000527046 SYTL4Q96C24 671 aaPredicted RBP14.21□□□□□ -0.13
NEDD8-205ENST00000527046 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 NEFMP07197 916 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 SLC39A6Q13433 755 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 TMOD3Q9NYL9 352 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 LY75O60449 1722 aa14.2□□□□□ -0.14
NEDD8-205ENST00000527046 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
NEDD8-205ENST00000527046 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
NEDD8-205ENST00000527046 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
NEDD8-205ENST00000527046 EZH2Q15910 746 aaKnown RBP14.19□□□□□ -0.14
NEDD8-205ENST00000527046 LRRC4BQ9NT99 713 aa14.19□□□□□ -0.14
NEDD8-205ENST00000527046 KCNQ4P56696 695 aa14.18□□□□□ -0.14
NEDD8-205ENST00000527046 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
NEDD8-205ENST00000527046 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-205ENST00000527046 CHL1O00533 1208 aa14.17□□□□□ -0.14
NEDD8-205ENST00000527046 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
NEDD8-205ENST00000527046 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
NEDD8-205ENST00000527046 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
NEDD8-205ENST00000527046 TEFQ10587 303 aa14.16□□□□□ -0.14
NEDD8-205ENST00000527046 TXNRD1Q16881 649 aa14.16□□□□□ -0.14
NEDD8-205ENST00000527046 ZNF790Q6PG37 636 aa14.16□□□□□ -0.14
NEDD8-205ENST00000527046 HEG1Q9ULI3 1381 aa14.16□□□□□ -0.14
NEDD8-205ENST00000527046 KDM3BQ7LBC6 1761 aa14.16□□□□□ -0.14
NEDD8-205ENST00000527046 RGPD3A6NKT7 1758 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-205ENST00000527046 RGPD4Q7Z3J3 1758 aa14.15□□□□□ -0.14
NEDD8-205ENST00000527046 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
NEDD8-205ENST00000527046 ITPK1Q13572 414 aa14.15□□□□□ -0.14
NEDD8-205ENST00000527046 ZNF496Q96IT1 587 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-205ENST00000527046 RREB1Q92766 1687 aa14.14□□□□□ -0.15
NEDD8-205ENST00000527046 BTBD11A6QL63 1104 aa14.14□□□□□ -0.15
NEDD8-205ENST00000527046 BAG6P46379 1132 aa14.14□□□□□ -0.15
NEDD8-205ENST00000527046 LMOD3Q0VAK6 560 aa14.14□□□□□ -0.15
NEDD8-205ENST00000527046 LOC102724428A0A0B4J2F2 783 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 PRAMEF22A3QJZ6 481 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 SIK1P57059 783 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
NEDD8-205ENST00000527046 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 NGEFQ8N5V2 710 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 SMARCC1Q92922 1105 aaPredicted RBP14.13□□□□□ -0.15
NEDD8-205ENST00000527046 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 BABAM1Q9NWV8 329 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
NEDD8-205ENST00000527046 PTCD1O75127 700 aaKnown RBP14.12□□□□□ -0.15
NEDD8-205ENST00000527046 MBIPQ9NS73 344 aa14.12□□□□□ -0.15
NEDD8-205ENST00000527046 TAF1LQ8IZX4 1826 aa14.12□□□□□ -0.15
NEDD8-205ENST00000527046 TJP1Q07157 1748 aa14.12□□□□□ -0.15
NEDD8-205ENST00000527046 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
NEDD8-205ENST00000527046 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
NEDD8-205ENST00000527046 NUP188Q5SRE5 1749 aa14.11□□□□□ -0.15
NEDD8-205ENST00000527046 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
NEDD8-205ENST00000527046 LINC00116Q8NCU8 138 aa14.11□□□□□ -0.15
NEDD8-205ENST00000527046 IFT57Q9NWB7 429 aa14.11□□□□□ -0.15
NEDD8-205ENST00000527046 CICQ96RK0 1608 aaPredicted RBP14.11□□□□□ -0.15
NEDD8-205ENST00000527046 IL16Q14005 1332 aa14.11□□□□□ -0.15
NEDD8-205ENST00000527046 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
NEDD8-205ENST00000527046 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
NEDD8-205ENST00000527046 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
NEDD8-205ENST00000527046 CCNL1Q9UK58 526 aaPredicted RBP14.1□□□□□ -0.15
NEDD8-205ENST00000527046 USP16Q9Y5T5 823 aa14.1□□□□□ -0.15
NEDD8-205ENST00000527046 MYH14Q7Z406 1995 aaKnown RBP14.1□□□□□ -0.15
NEDD8-205ENST00000527046 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
NEDD8-205ENST00000527046 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
NEDD8-205ENST00000527046 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
NEDD8-205ENST00000527046 DNAJC10Q8IXB1 793 aa14.09□□□□□ -0.15
NEDD8-205ENST00000527046 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
NEDD8-205ENST00000527046 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
NEDD8-205ENST00000527046 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
NEDD8-205ENST00000527046 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
NEDD8-205ENST00000527046 COL5A3P25940 1745 aaPredicted RBP14.09□□□□□ -0.15
NEDD8-205ENST00000527046 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.16
NEDD8-205ENST00000527046 GNAI1P63096 354 aa14.08□□□□□ -0.16
NEDD8-205ENST00000527046 SLFN5Q08AF3 891 aa14.08□□□□□ -0.16
NEDD8-205ENST00000527046 INTS5Q6P9B9 1019 aaKnown RBP14.08□□□□□ -0.16
NEDD8-205ENST00000527046 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.16
NEDD8-205ENST00000527046 LAS1LQ9Y4W2 734 aaKnown RBP14.08□□□□□ -0.16
NEDD8-205ENST00000527046 C5P01031 1676 aa14.07□□□□□ -0.16
NEDD8-205ENST00000527046 HNRNPUQ00839 825 aaKnown RBP eCLIP14.07□□□□□ -0.16
NEDD8-205ENST00000527046 ZNF827Q17R98 1081 aa14.07□□□□□ -0.16
NEDD8-205ENST00000527046 SMIM5Q71RC9 77 aa14.07□□□□□ -0.16
NEDD8-205ENST00000527046 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
NEDD8-205ENST00000527046 C8orf58Q8NAV2 365 aa14.07□□□□□ -0.16
NEDD8-205ENST00000527046 FMNL2Q96PY5 1086 aa14.07□□□□□ -0.16
NEDD8-205ENST00000527046 C4BP0C0L5 1744 aa14.05□□□□□ -0.16
NEDD8-205ENST00000527046 SNRPA1P09661 255 aaKnown RBP14.05□□□□□ -0.16
NEDD8-205ENST00000527046 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
NEDD8-205ENST00000527046 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
NEDD8-205ENST00000527046 TTC5Q8N0Z6 440 aa14.05□□□□□ -0.16
NEDD8-205ENST00000527046 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
NEDD8-205ENST00000527046 NBPF26B4DH59 902 aa14.04□□□□□ -0.16
NEDD8-205ENST00000527046 A1BGP04217 495 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms