RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
CAPN1-205ENST00000526954 BTAF1O14981 1849 aa21.62■■□□□ 1.05
CAPN1-205ENST00000526954 TAF7Q15545 349 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-205ENST00000526954 PIGBQ92521 554 aa21.62■■□□□ 1.05
CAPN1-205ENST00000526954 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-205ENST00000526954 IL16Q14005 1332 aa21.61■■□□□ 1.05
CAPN1-205ENST00000526954 BABAM1Q9NWV8 329 aa21.61■■□□□ 1.05
CAPN1-205ENST00000526954 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
CAPN1-205ENST00000526954 TRIM37O94972 964 aa21.6■■□□□ 1.05
CAPN1-205ENST00000526954 ILDR2Q71H61 639 aa21.59■■□□□ 1.05
CAPN1-205ENST00000526954 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
CAPN1-205ENST00000526954 TNS1Q9HBL0 1735 aaKnown RBP21.59■■□□□ 1.05
CAPN1-205ENST00000526954 KDM3BQ7LBC6 1761 aa21.59■■□□□ 1.05
CAPN1-205ENST00000526954 ZBED9Q6R2W3 1325 aa21.58■■□□□ 1.05
CAPN1-205ENST00000526954 ZNF853P0CG23 659 aa21.58■■□□□ 1.05
CAPN1-205ENST00000526954 CFAP44Q96MT7 982 aa21.58■■□□□ 1.05
CAPN1-205ENST00000526954 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
CAPN1-205ENST00000526954 CHL1O00533 1208 aa21.57■■□□□ 1.04
CAPN1-205ENST00000526954 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
CAPN1-205ENST00000526954 GNAI1P63096 354 aa21.56■■□□□ 1.04
CAPN1-205ENST00000526954 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
CAPN1-205ENST00000526954 CCDC125Q86Z20 511 aa21.55■■□□□ 1.04
CAPN1-205ENST00000526954 ATG3Q9NT62 314 aa21.55■■□□□ 1.04
CAPN1-205ENST00000526954 GOLGA2Q08379 1002 aa21.54■■□□□ 1.04
CAPN1-205ENST00000526954 ZNF790Q6PG37 636 aa21.54■■□□□ 1.04
CAPN1-205ENST00000526954 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-205ENST00000526954 ASAP1Q9ULH1 1129 aa21.54■■□□□ 1.04
CAPN1-205ENST00000526954 MIS18AQ9NYP9 233 aa21.53■■□□□ 1.04
CAPN1-205ENST00000526954 TSPYL4Q9UJ04 414 aa21.53■■□□□ 1.04
CAPN1-205ENST00000526954 LY75O60449 1722 aa21.52■■□□□ 1.04
CAPN1-205ENST00000526954 RGPD3A6NKT7 1758 aaPredicted RBP21.52■■□□□ 1.04
CAPN1-205ENST00000526954 RGPD4Q7Z3J3 1758 aa21.52■■□□□ 1.04
CAPN1-205ENST00000526954 SLC39A6Q13433 755 aa21.52■■□□□ 1.04
CAPN1-205ENST00000526954 LAS1LQ9Y4W2 734 aaKnown RBP21.52■■□□□ 1.04
CAPN1-205ENST00000526954 PLSCR1O15162 318 aa21.51■■□□□ 1.03
CAPN1-205ENST00000526954 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
CAPN1-205ENST00000526954 MBIPQ9NS73 344 aa21.51■■□□□ 1.03
CAPN1-205ENST00000526954 ZNF831Q5JPB2 1677 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 PALLDQ8WX93 1383 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 E9PSI1 815 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 KCNQ3O43525 872 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 SLFN5Q08AF3 891 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 TTC5Q8N0Z6 440 aa21.5■■□□□ 1.03
CAPN1-205ENST00000526954 APBA3O96018 575 aa21.49■■□□□ 1.03
CAPN1-205ENST00000526954 TRMT2AQ8IZ69 625 aaKnown RBP21.49■■□□□ 1.03
CAPN1-205ENST00000526954 EIF4A1P60842 406 aaKnown RBP21.48■■□□□ 1.03
CAPN1-205ENST00000526954 SF3B2Q13435 895 aaKnown RBP21.48■■□□□ 1.03
CAPN1-205ENST00000526954 UPF1Q92900 1129 aaKnown RBP eCLIP21.48■■□□□ 1.03
CAPN1-205ENST00000526954 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
CAPN1-205ENST00000526954 MYH16Q9H6N6 1097 aa21.48■■□□□ 1.03
CAPN1-205ENST00000526954 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
CAPN1-205ENST00000526954 CDCA7LQ96GN5 454 aa21.47■■□□□ 1.03
CAPN1-205ENST00000526954 ZNF496Q96IT1 587 aaPredicted RBP21.47■■□□□ 1.03
CAPN1-205ENST00000526954 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
CAPN1-205ENST00000526954 FANCIQ9NVI1 1328 aa21.47■■□□□ 1.03
CAPN1-205ENST00000526954 CICQ96RK0 1608 aaPredicted RBP21.47■■□□□ 1.03
CAPN1-205ENST00000526954 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
CAPN1-205ENST00000526954 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
CAPN1-205ENST00000526954 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
CAPN1-205ENST00000526954 PTCD1O75127 700 aaKnown RBP21.45■■□□□ 1.02
CAPN1-205ENST00000526954 SIK1P57059 783 aa21.45■■□□□ 1.02
CAPN1-205ENST00000526954 BAG6P46379 1132 aa21.44■■□□□ 1.02
CAPN1-205ENST00000526954 SLC4A9Q96Q91 983 aa21.44■■□□□ 1.02
CAPN1-205ENST00000526954 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
CAPN1-205ENST00000526954 DUSP27Q5VZP5 1158 aa21.43■■□□□ 1.02
CAPN1-205ENST00000526954 CAMKK2Q96RR4 588 aa21.43■■□□□ 1.02
CAPN1-205ENST00000526954 TJP1Q07157 1748 aa21.43■■□□□ 1.02
CAPN1-205ENST00000526954 GIGYF1O75420 1035 aaPredicted RBP21.42■■□□□ 1.02
CAPN1-205ENST00000526954 SLC27A3Q5K4L6 730 aa21.42■■□□□ 1.02
CAPN1-205ENST00000526954 TAF1LQ8IZX4 1826 aa21.42■■□□□ 1.02
CAPN1-205ENST00000526954 PROM2Q8N271 834 aa21.42■■□□□ 1.02
CAPN1-205ENST00000526954 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
CAPN1-205ENST00000526954 TXNRD1Q16881 649 aa21.41■■□□□ 1.02
CAPN1-205ENST00000526954 C5P01031 1676 aa21.4■■□□□ 1.02
CAPN1-205ENST00000526954 SOS1Q07889 1333 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-205ENST00000526954 HOXB7P09629 217 aa21.4■■□□□ 1.02
CAPN1-205ENST00000526954 ATP6V1AP38606 617 aa21.4■■□□□ 1.02
CAPN1-205ENST00000526954 EN1Q05925 392 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-205ENST00000526954 TEX13AQ9BXU3 409 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-205ENST00000526954 CCNL1Q9UK58 526 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-205ENST00000526954 LAMB4A4D0S4 1761 aa21.4■■□□□ 1.02
CAPN1-205ENST00000526954 COL5A3P25940 1745 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-205ENST00000526954 RREB1Q92766 1687 aa21.4■■□□□ 1.02
CAPN1-205ENST00000526954 HMGB2P26583 209 aaKnown RBP21.39■■□□□ 1.01
CAPN1-205ENST00000526954 EXOSC9Q06265 439 aaKnown RBP21.39■■□□□ 1.01
CAPN1-205ENST00000526954 KRT24Q2M2I5 525 aa21.39■■□□□ 1.01
CAPN1-205ENST00000526954 C8orf58Q8NAV2 365 aa21.39■■□□□ 1.01
CAPN1-205ENST00000526954 EZH2Q15910 746 aaKnown RBP21.38■■□□□ 1.01
CAPN1-205ENST00000526954 DEFB132Q7Z7B7 95 aa21.38■■□□□ 1.01
CAPN1-205ENST00000526954 LRRC4BQ9NT99 713 aa21.38■■□□□ 1.01
CAPN1-205ENST00000526954 ITPK1Q13572 414 aa21.37■■□□□ 1.01
CAPN1-205ENST00000526954 DNAJC10Q8IXB1 793 aa21.37■■□□□ 1.01
CAPN1-205ENST00000526954 TSPYL6Q8N831 410 aa21.37■■□□□ 1.01
CAPN1-205ENST00000526954 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
CAPN1-205ENST00000526954 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
CAPN1-205ENST00000526954 KCNQ4P56696 695 aa21.35■■□□□ 1.01
CAPN1-205ENST00000526954 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
CAPN1-205ENST00000526954 STARD3NLO95772 234 aa21.34■■□□□ 1.01
CAPN1-205ENST00000526954 CT47B1P0C2W7 299 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms