RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 PA2G4Q9UQ80 394 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 NUP160Q12769 1436 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 A0A1W2PP64 1363 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 BIN1O00499 593 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 INSRP06213 1382 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 SPATA32Q96LK8 384 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 SRCIN1Q9C0H9 1055 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 APPP05067 770 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 FLIIQ13045 1269 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 PPP1R42Q7Z4L9 355 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 ANKRD44Q8N8A2 993 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 ERCC4Q92889 916 aaPredicted RBP8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 DCTPP1Q9H773 170 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 RTEL1-TNFRSF6BF6WH68 1400 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 RAB11FIP3O75154 756 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 PDILTQ8N807 584 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 ESYT1Q9BSJ8 1104 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 NUP62CLQ9H1M0 184 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 NDUFB9Q9Y6M9 179 aa8.28□□□□□ -1.08
TGFBR3-207ENST00000525962 PNMA6EA0A0J9YXQ4 647 aa8.27□□□□□ -1.08
TGFBR3-207ENST00000525962 STX6O43752 255 aa8.27□□□□□ -1.08
TGFBR3-207ENST00000525962 ME1P48163 572 aa8.27□□□□□ -1.08
TGFBR3-207ENST00000525962 CCT4P50991 539 aaKnown RBP8.27□□□□□ -1.08
TGFBR3-207ENST00000525962 CCDC186Q7Z3E2 898 aa8.27□□□□□ -1.08
TGFBR3-207ENST00000525962 LUZP1Q86V48 1076 aa8.27□□□□□ -1.08
TGFBR3-207ENST00000525962 PLA2R1Q13018 1463 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 WDR7Q9Y4E6 1490 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 A0A087WWV3 80 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 PTGS1P23219 599 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 CCT2P78371 535 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 TAF7LQ5H9L4 462 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 CCDC112Q8NEF3 446 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 MCM2P49736 904 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 TPM4P67936 248 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 KRT85P78386 507 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 CCDC73Q6ZRK6 1079 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 CCDC61Q9Y6R9 512 aa8.27□□□□□ -1.09
TGFBR3-207ENST00000525962 FAM69CQ0P6D2 419 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 C1orf141Q5JVX7 400 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 CCDC183Q5T5S1 534 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 MPRIPQ6WCQ1 1025 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 PHAXQ9H814 394 aaKnown RBP8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 U2AF2P26368 475 aaKnown RBP eCLIP8.26□□□□□ -1.097e-7■■■□□ 17
TGFBR3-207ENST00000525962 WASHC4Q2M389 1173 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 UNC5CLQ8IV45 518 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 PI4KAP2A4QPH2 592 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 TNNT1P13805 278 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 HDGFP51858 240 aaKnown RBP8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 AK2P54819 239 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 BLOC1S2Q6QNY1 142 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 PI4KAP1Q8N8J0 262 aa8.26□□□□□ -1.09
TGFBR3-207ENST00000525962 CPLX1O14810 134 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 NOL7Q9UMY1 257 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 MAP3K11Q16584 847 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 CHST3Q7LGC8 479 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 MTERF4Q7Z6M4 381 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 ARHGEF12Q9NZN5 1544 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 BRPF1P55201 1214 aaPredicted RBP8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 MNS1Q8NEH6 495 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 DACT1Q9NYF0 836 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 LIMCH1Q9UPQ0 1083 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 MSH6P52701 1360 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 ABCC11Q96J66 1382 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 GCC2Q8IWJ2 1684 aa8.25□□□□□ -1.09
TGFBR3-207ENST00000525962 POLR3GO15318 223 aaPredicted RBP8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 SYT1P21579 422 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 EIF4A2Q14240 407 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 RNF20Q5VTR2 975 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 KLHDC4Q8TBB5 520 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 KINO60870 393 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 UGGT1Q9NYU2 1555 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 CHMLP26374 656 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 CEBPAP49715 358 aaPredicted RBP8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 PSME1Q06323 249 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 LRMPQ12912 555 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 MTHFSDQ2M296 383 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 RASSF8Q8NHQ8 419 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 CLIP2Q9UDT6 1046 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 PPIP5K1Q6PFW1 1433 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 KIAA0556O60303 1618 aa8.24□□□□□ -1.09
TGFBR3-207ENST00000525962 ZSCAN22P10073 491 aaPredicted RBP8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 NEXNQ0ZGT2 675 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 ZNF530Q6P9A1 599 aaPredicted RBP8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 KIF2CQ99661 725 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 ZSWIM4Q9H7M6 989 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 PTPRTO14522 1441 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 ANKRD36BQ8N2N9 1353 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 DYNC1I1O14576 645 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 ZNF165P49910 485 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 PLEKHF1Q96S99 279 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 RHPN1Q8TCX5 695 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 645.5 ms