RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 MCM4P33991 863 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 CAMK4Q16566 473 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 EPS15P42566 896 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
CHD7-203ENST00000525508 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 CDK5RAP3Q96JB5 506 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
CHD7-203ENST00000525508 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 TNNT3P45378 269 aaPredicted RBP9.84□□□□□ -0.83
CHD7-203ENST00000525508 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 DENND4BO75064 1496 aaPredicted RBP9.84□□□□□ -0.83
CHD7-203ENST00000525508 KRT18P05783 430 aaKnown RBP9.84□□□□□ -0.83
CHD7-203ENST00000525508 HAND2P61296 217 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 TNMDQ9H2S6 317 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 TSPY26PQ9H489 355 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 WDR33Q9C0J8 1336 aaKnown RBP9.84□□□□□ -0.83
CHD7-203ENST00000525508 ZPR1O75312 459 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 CT47A1Q5JQC4 288 aaPredicted RBP9.83□□□□□ -0.84
CHD7-203ENST00000525508 FILIP1Q7Z7B0 1213 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 ANKIB1Q9P2G1 1089 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 RAB11FIP3O75154 756 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 CCAR1Q8IX12 1150 aaKnown RBP9.83□□□□□ -0.84
CHD7-203ENST00000525508 NAT10Q9H0A0 1025 aaKnown RBP9.83□□□□□ -0.84
CHD7-203ENST00000525508 ATP10BO94823 1461 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 CCT2P78371 535 aaKnown RBP9.83□□□□□ -0.84
CHD7-203ENST00000525508 TRMT1LQ7Z2T5 733 aaKnown RBP9.83□□□□□ -0.84
CHD7-203ENST00000525508 MNS1Q8NEH6 495 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 UBE2Q2Q8WVN8 375 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 SPATA32Q96LK8 384 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 DHX8Q14562 1220 aaKnown RBP9.83□□□□□ -0.84
CHD7-203ENST00000525508 LDHAL6AQ6ZMR3 332 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
CHD7-203ENST00000525508 GOLIM4O00461 696 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
CHD7-203ENST00000525508 PATL2C9JE40 543 aaKnown RBP9.82□□□□□ -0.84
CHD7-203ENST00000525508 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 PHACTR3Q96KR7 559 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 ZNF396Q96N95 335 aaPredicted RBP9.82□□□□□ -0.84
CHD7-203ENST00000525508 CHPF2Q9P2E5 772 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 KIF14Q15058 1648 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 SERPINC1P01008 464 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 SKIDA1Q1XH10 827 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 SCAF11Q99590 1463 aaKnown RBP9.82□□□□□ -0.84
CHD7-203ENST00000525508 SYCE3A1L190 88 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 ANKRD1Q15327 319 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 CCDC144CPQ8IYA2 1237 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 C16orf71Q8IYS4 520 aaPredicted RBP9.82□□□□□ -0.84
CHD7-203ENST00000525508 CARD14Q9BXL6 1004 aa9.82□□□□□ -0.84
CHD7-203ENST00000525508 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 TFIP11Q9UBB9 837 aaKnown RBP9.81□□□□□ -0.84
CHD7-203ENST00000525508 POLKQ9UBT6 870 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 MPHOSPH10O00566 681 aaKnown RBP9.81□□□□□ -0.84
CHD7-203ENST00000525508 RANBP6O60518 1105 aaKnown RBP9.81□□□□□ -0.84
CHD7-203ENST00000525508 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
CHD7-203ENST00000525508 IMMTQ16891 758 aaKnown RBP9.81□□□□□ -0.84
CHD7-203ENST00000525508 TXLNAP40222 546 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 COPS6Q7L5N1 327 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 TBC1D2Q9BYX2 928 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 NAPBQ9H115 298 aa9.81□□□□□ -0.84
CHD7-203ENST00000525508 LRPPRCP42704 1394 aaKnown RBP9.8□□□□□ -0.84
CHD7-203ENST00000525508 ZSCAN25Q6NSZ9 544 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
CHD7-203ENST00000525508 CTNNA3Q9UI47 895 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 TRAPPC8Q9Y2L5 1435 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 SSFA2P28290 1259 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
CHD7-203ENST00000525508 SOGA3Q5TF21 947 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 LRRC2Q9BYS8 371 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 RBM10P98175 930 aaKnown RBP9.8□□□□□ -0.84
CHD7-203ENST00000525508 CCDC70Q6NSX1 233 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 XAGE3Q8WTP9 111 aa9.8□□□□□ -0.84
CHD7-203ENST00000525508 CCDC192P0DO97 292 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 RLBP1P12271 317 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 ANKRD13DQ6ZTN6 518 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 JMYQ8N9B5 988 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 KCNA6P17658 529 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 TESK2Q96S53 571 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 PANK2Q9BZ23 570 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 MKNK2Q9HBH9 465 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 HYPKQ9NX55 129 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 PA2G4Q9UQ80 394 aaKnown RBP9.79□□□□□ -0.84
CHD7-203ENST00000525508 KDM5BQ9UGL1 1544 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
CHD7-203ENST00000525508 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 GRPEL1Q9HAV7 217 aa9.79□□□□□ -0.84
CHD7-203ENST00000525508 U3KPZ7 1027 aaPredicted RBP9.79□□□□□ -0.84
CHD7-203ENST00000525508 MTHFSDQ2M296 383 aaKnown RBP9.78□□□□□ -0.84
CHD7-203ENST00000525508 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms