RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 TATDN2Q93075 761 aa8.62□□□□□ -1.03
CCDC90B-204ENST00000525504 HIRIP3Q9BW71 556 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-204ENST00000525504 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
CCDC90B-204ENST00000525504 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 PLEKHG3A1L390 1219 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 C3orf80F5H4A9 247 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 RNF40O75150 1001 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 TSR1Q2NL82 804 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 LMOD2Q6P5Q4 547 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 PMFBP1Q8TBY8 1022 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 GJD4Q96KN9 370 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 FAM198AQ9UFP1 575 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 ATRNO75882 1429 aa8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-204ENST00000525504 FAM83GA6ND36 823 aa8.6□□□□□ -1.03
CCDC90B-204ENST00000525504 TNFRSF10AO00220 468 aa8.6□□□□□ -1.03
CCDC90B-204ENST00000525504 DDX12PQ92771 950 aa8.6□□□□□ -1.03
CCDC90B-204ENST00000525504 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-204ENST00000525504 CDK19Q9BWU1 502 aa8.6□□□□□ -1.03
CCDC90B-204ENST00000525504 ARHGEF10O15013 1369 aa8.6□□□□□ -1.03
CCDC90B-204ENST00000525504 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 AVPP01185 164 aa8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 CABLES1Q8TDN4 633 aa8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 TNS3Q68CZ2 1445 aa8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
CCDC90B-204ENST00000525504 IFT172Q9UG01 1749 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 RGS12O14924 1447 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 MAP3K7O43318 606 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 VPS72Q15906 364 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 NBPF8Q3BBV2 869 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 SIN3AQ96ST3 1273 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 PRR14Q9BWN1 585 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 SLIT2O94813 1529 aa8.58□□□□□ -1.04
CCDC90B-204ENST00000525504 CAMK2BQ13554 666 aa8.57□□□□□ -1.04
CCDC90B-204ENST00000525504 SLF2Q8IX21 1173 aa8.57□□□□□ -1.04
CCDC90B-204ENST00000525504 GMPR2Q9P2T1 348 aaKnown RBP8.57□□□□□ -1.04
CCDC90B-204ENST00000525504 COL22A1Q8NFW1 1626 aaPredicted RBP8.56□□□□□ -1.04
CCDC90B-204ENST00000525504 DPYSL4O14531 572 aa8.56□□□□□ -1.04
CCDC90B-204ENST00000525504 CTC1Q2NKJ3 1217 aa8.56□□□□□ -1.04
CCDC90B-204ENST00000525504 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
CCDC90B-204ENST00000525504 KNDC1Q76NI1 1749 aa8.56□□□□□ -1.04
CCDC90B-204ENST00000525504 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
CCDC90B-204ENST00000525504 ADGRB2O60241 1585 aa8.55□□□□□ -1.04
CCDC90B-204ENST00000525504 ACEP12821 1306 aa8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 ATAD2Q6PL18 1390 aa8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 NBR1Q14596 966 aa8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 DACH1Q9UI36 760 aa8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 TULP4Q9NRJ4 1543 aa8.54□□□□□ -1.04
CCDC90B-204ENST00000525504 RALGAPBQ86X10 1494 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 BTG4Q9NY30 223 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 FMN2Q9NZ56 1722 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 SRCAPQ6ZRS2 3230 aa8.53□□□□□ -1.04
CCDC90B-204ENST00000525504 ATP7BP35670 1465 aa8.52□□□□□ -1.05
CCDC90B-204ENST00000525504 BRD4O60885 1362 aaPredicted RBP8.52□□□□□ -1.05
CCDC90B-204ENST00000525504 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
CCDC90B-204ENST00000525504 AXIN1O15169 862 aa8.52□□□□□ -1.05
CCDC90B-204ENST00000525504 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
CCDC90B-204ENST00000525504 KIF1AQ12756 1690 aa8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 GTPBP6O43824 516 aaPredicted RBP8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 PRDM11Q9NQV5 511 aa8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
CCDC90B-204ENST00000525504 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
CCDC90B-204ENST00000525504 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
CCDC90B-204ENST00000525504 USP32Q8NFA0 1604 aa8.5□□□□□ -1.05
CCDC90B-204ENST00000525504 USP19O94966 1318 aa8.5□□□□□ -1.05
CCDC90B-204ENST00000525504 EVC2Q86UK5 1308 aa8.5□□□□□ -1.05
CCDC90B-204ENST00000525504 CPDO75976 1380 aa8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 SSH2Q76I76 1423 aa8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 PPEF1O14829 653 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 GCP02774 474 aa8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 KRT27Q7Z3Y8 459 aa8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 PUS7Q96PZ0 661 aaKnown RBP8.49□□□□□ -1.05
CCDC90B-204ENST00000525504 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 S1PR4O95977 384 aa8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 ZC3H6P61129 1189 aaKnown RBP8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 CHRNA2Q15822 529 aa8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 BLOC1S3Q6QNY0 202 aa8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 CCDC9Q9Y3X0 531 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms