RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 BLOC1S2Q6QNY1 142 aa15.87■□□□□ 0.13
LRRK1-202ENST00000525284 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.87■□□□□ 0.13
LRRK1-202ENST00000525284 V9GYY5 206 aaPredicted RBP15.87■□□□□ 0.13
LRRK1-202ENST00000525284 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
LRRK1-202ENST00000525284 ZMYND15Q9H091 742 aa15.87■□□□□ 0.13
LRRK1-202ENST00000525284 KIF3CO14782 793 aa15.87■□□□□ 0.13
LRRK1-202ENST00000525284 AAMPQ13685 434 aa15.87■□□□□ 0.13
LRRK1-202ENST00000525284 ZSCAN29Q8IWY8 852 aaPredicted RBP15.87■□□□□ 0.13
LRRK1-202ENST00000525284 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
LRRK1-202ENST00000525284 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
LRRK1-202ENST00000525284 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 SSX2IPQ9Y2D8 614 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 POTEB2H3BUK9 544 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 MCM4P33991 863 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
LRRK1-202ENST00000525284 FERMT2Q96AC1 680 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 HSF2BPO75031 334 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 TMCO4Q5TGY1 634 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
LRRK1-202ENST00000525284 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 CCDC83Q8IWF9 413 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 NLRP2Q9NX02 1062 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 MICALL1Q8N3F8 863 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 ALS2CR12Q96Q35 445 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 FEZ2Q9UHY8 353 aaPredicted RBP15.85■□□□□ 0.13
LRRK1-202ENST00000525284 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 TDO2P48775 406 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
LRRK1-202ENST00000525284 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
LRRK1-202ENST00000525284 MRPS9P82933 396 aaKnown RBP15.85■□□□□ 0.13
LRRK1-202ENST00000525284 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 YEATS4O95619 227 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 MIPOL1Q8TD10 442 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
LRRK1-202ENST00000525284 GNAI2P04899 355 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 NAA25Q14CX7 972 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 FERMT3Q86UX7 667 aa15.84■□□□□ 0.13
LRRK1-202ENST00000525284 NOP2P46087 812 aaKnown RBP15.84■□□□□ 0.13
LRRK1-202ENST00000525284 SPTY2D1Q68D10 685 aaPredicted RBP15.83■□□□□ 0.13
LRRK1-202ENST00000525284 ANO10Q9NW15 660 aa15.83■□□□□ 0.13
LRRK1-202ENST00000525284 DYNC1I1O14576 645 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 NUTM2GQ5VZR2 741 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 CCDC150Q8NCX0 1101 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 TTC36A6NLP5 189 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 JADE2Q9NQC1 790 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 FAM184BQ9ULE4 1060 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 RFC1P35251 1148 aaPredicted RBP15.83■□□□□ 0.12
LRRK1-202ENST00000525284 GCC1Q96CN9 775 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 PPP4R3AQ6IN85 833 aa15.83■□□□□ 0.12
LRRK1-202ENST00000525284 CWC27Q6UX04 472 aaKnown RBP15.83■□□□□ 0.12
LRRK1-202ENST00000525284 WASF1Q92558 559 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 ARID4AP29374 1257 aaPredicted RBP15.82■□□□□ 0.12
LRRK1-202ENST00000525284 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 ATRIPQ8WXE1 791 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 IQCGQ9H095 443 aaKnown RBP15.82■□□□□ 0.12
LRRK1-202ENST00000525284 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
LRRK1-202ENST00000525284 SMC6Q96SB8 1091 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 NSRP1Q9H0G5 558 aaKnown RBP15.82■□□□□ 0.12
LRRK1-202ENST00000525284 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
LRRK1-202ENST00000525284 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 WDR78Q5VTH9 848 aa15.82■□□□□ 0.12
LRRK1-202ENST00000525284 SREK1Q8WXA9 508 aaKnown RBP15.82■□□□□ 0.12
LRRK1-202ENST00000525284 KIF4AO95239 1232 aa15.81■□□□□ 0.12
LRRK1-202ENST00000525284 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
LRRK1-202ENST00000525284 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
LRRK1-202ENST00000525284 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
LRRK1-202ENST00000525284 DZIP1Q86YF9 867 aaKnown RBP15.81■□□□□ 0.12
LRRK1-202ENST00000525284 NDC80O14777 642 aa15.8■□□□□ 0.12
LRRK1-202ENST00000525284 CEP120Q8N960 986 aa15.8■□□□□ 0.12
LRRK1-202ENST00000525284 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
LRRK1-202ENST00000525284 CPSF2Q9P2I0 782 aaKnown RBP15.8■□□□□ 0.12
LRRK1-202ENST00000525284 TNIP1Q15025 636 aa15.8■□□□□ 0.12
LRRK1-202ENST00000525284 CA8P35219 290 aa15.8■□□□□ 0.12
LRRK1-202ENST00000525284 TMC6Q7Z403 805 aa15.8■□□□□ 0.12
LRRK1-202ENST00000525284 ZBTB16Q05516 673 aa15.8■□□□□ 0.12
LRRK1-202ENST00000525284 MYO1BO43795 1136 aa15.79■□□□□ 0.12
LRRK1-202ENST00000525284 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
LRRK1-202ENST00000525284 ACTN2P35609 894 aa15.79■□□□□ 0.12
LRRK1-202ENST00000525284 USP25Q9UHP3 1055 aa15.79■□□□□ 0.12
LRRK1-202ENST00000525284 SNW1Q13573 536 aaKnown RBP15.79■□□□□ 0.12
LRRK1-202ENST00000525284 CCDC63Q8NA47 563 aa15.79■□□□□ 0.12
LRRK1-202ENST00000525284 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
LRRK1-202ENST00000525284 ZBTB9Q96C00 473 aa15.79■□□□□ 0.12
LRRK1-202ENST00000525284 PUF60Q9UHX1 559 aaKnown RBP15.79■□□□□ 0.12
LRRK1-202ENST00000525284 NOB1Q9ULX3 412 aaKnown RBP15.79■□□□□ 0.12
LRRK1-202ENST00000525284 ZFYP08048 801 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-202ENST00000525284 CKAP4Q07065 602 aaKnown RBP15.78■□□□□ 0.12
LRRK1-202ENST00000525284 KIAA0753Q2KHM9 967 aa15.78■□□□□ 0.12
LRRK1-202ENST00000525284 AACSQ86V21 672 aa15.78■□□□□ 0.12
LRRK1-202ENST00000525284 FGFR1OPO95684 399 aaKnown RBP15.78■□□□□ 0.12
LRRK1-202ENST00000525284 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
LRRK1-202ENST00000525284 USP47Q96K76 1375 aa15.78■□□□□ 0.12
LRRK1-202ENST00000525284 MTIF2P46199 727 aaKnown RBP15.78■□□□□ 0.12
LRRK1-202ENST00000525284 CCDC12Q8WUD4 166 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-202ENST00000525284 PRC1O43663 620 aa15.78■□□□□ 0.12
LRRK1-202ENST00000525284 KIF5BP33176 963 aa15.78■□□□□ 0.12
LRRK1-202ENST00000525284 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
LRRK1-202ENST00000525284 CKAP2LQ8IYA6 745 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms