RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PXDNLA1KZ92 1463 aa10.22□□□□□ -0.77
CHD7-202ENST00000524602 TSPYL4Q9UJ04 414 aa10.22□□□□□ -0.77
CHD7-202ENST00000524602 ANKARQ7Z5J8 1434 aa10.21□□□□□ -0.77
CHD7-202ENST00000524602 KLHL40Q2TBA0 621 aa10.21□□□□□ -0.77
CHD7-202ENST00000524602 ANKLE2Q86XL3 938 aa10.21□□□□□ -0.77
CHD7-202ENST00000524602 C16orf71Q8IYS4 520 aaPredicted RBP10.21□□□□□ -0.77
CHD7-202ENST00000524602 RRAGDQ9NQL2 400 aaPredicted RBP10.21□□□□□ -0.77
CHD7-202ENST00000524602 ERC2O15083 957 aa10.21□□□□□ -0.78
CHD7-202ENST00000524602 CLCN1P35523 988 aa10.21□□□□□ -0.78
CHD7-202ENST00000524602 MTHFSDQ2M296 383 aaKnown RBP10.21□□□□□ -0.78
CHD7-202ENST00000524602 STK31Q9BXU1 1019 aa10.21□□□□□ -0.78
CHD7-202ENST00000524602 PANK2Q9BZ23 570 aa10.21□□□□□ -0.78
CHD7-202ENST00000524602 GNAI2P04899 355 aa10.2□□□□□ -0.78
CHD7-202ENST00000524602 NAP1L5Q96NT1 182 aaPredicted RBP10.2□□□□□ -0.78
CHD7-202ENST00000524602 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
CHD7-202ENST00000524602 BAG4O95429 457 aaKnown RBP10.2□□□□□ -0.78
CHD7-202ENST00000524602 CYP2E1P05181 493 aaPredicted RBP10.2□□□□□ -0.78
CHD7-202ENST00000524602 GNAI3P08754 354 aa10.2□□□□□ -0.78
CHD7-202ENST00000524602 SSFA2P28290 1259 aa10.2□□□□□ -0.78
CHD7-202ENST00000524602 CCDC30Q5VVM6 783 aa10.19□□□□□ -0.78
CHD7-202ENST00000524602 NGDNQ8NEJ9 315 aaKnown RBP10.19□□□□□ -0.78
CHD7-202ENST00000524602 OTUD7AQ8TE49 926 aaPredicted RBP10.19□□□□□ -0.78
CHD7-202ENST00000524602 PDE1AP54750 535 aa10.19□□□□□ -0.78
CHD7-202ENST00000524602 MARF1Q9Y4F3 1742 aaKnown RBP10.19□□□□□ -0.78
CHD7-202ENST00000524602 SOX12O15370 315 aa10.19□□□□□ -0.78
CHD7-202ENST00000524602 MCM2P49736 904 aa10.19□□□□□ -0.78
CHD7-202ENST00000524602 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
CHD7-202ENST00000524602 EPB41L2O43491 1005 aaKnown RBP10.18□□□□□ -0.78
CHD7-202ENST00000524602 SMARCA5O60264 1052 aaPredicted RBP10.18□□□□□ -0.78
CHD7-202ENST00000524602 AMPHP49418 695 aa10.18□□□□□ -0.78
CHD7-202ENST00000524602 EYA1Q99502 592 aa10.18□□□□□ -0.78
CHD7-202ENST00000524602 SRCIN1Q9C0H9 1055 aa10.18□□□□□ -0.78
CHD7-202ENST00000524602 AOX1Q06278 1338 aa10.18□□□□□ -0.78
CHD7-202ENST00000524602 SALL3Q9BXA9 1300 aa10.18□□□□□ -0.78
CHD7-202ENST00000524602 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
CHD7-202ENST00000524602 GNAT3A8MTJ3 354 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 NWD1Q149M9 1564 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 G2E3Q7L622 706 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 IL17RAQ96F46 866 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 LRRCC1Q9C099 1032 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 DDX49Q9Y6V7 483 aaKnown RBP10.17□□□□□ -0.78
CHD7-202ENST00000524602 FOXO3O43524 673 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 ANAPC15P60006 121 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 FLIIQ13045 1269 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 MAP3K5Q99683 1374 aa10.17□□□□□ -0.78
CHD7-202ENST00000524602 MCCP23508 829 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 ZNF445P59923 1031 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 ATP8B2P98198 1209 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 GAS2L3Q86XJ1 694 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 AK9Q5TCS8 1911 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 CCDC173Q0VFZ6 552 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 TRIM44Q96DX7 344 aaPredicted RBP10.16□□□□□ -0.78
CHD7-202ENST00000524602 CHMP4AQ9BY43 222 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 MIS18AQ9NYP9 233 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 STAP2Q9UGK3 403 aa10.16□□□□□ -0.78
CHD7-202ENST00000524602 F6X3S4 739 aa10.15□□□□□ -0.78
CHD7-202ENST00000524602 MX1P20591 662 aa10.15□□□□□ -0.78
CHD7-202ENST00000524602 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
CHD7-202ENST00000524602 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.78
CHD7-202ENST00000524602 NPHP4O75161 1426 aaPredicted RBP10.15□□□□□ -0.78
CHD7-202ENST00000524602 APBB1O00213 710 aa10.15□□□□□ -0.78
CHD7-202ENST00000524602 FKBP5Q13451 457 aaPredicted RBP10.15□□□□□ -0.78
CHD7-202ENST00000524602 HSP90AA2PQ14568 343 aaPredicted RBP10.15□□□□□ -0.78
CHD7-202ENST00000524602 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.78
CHD7-202ENST00000524602 ESPNB1AK53 854 aa10.15□□□□□ -0.79
CHD7-202ENST00000524602 HOXC9P31274 260 aa10.15□□□□□ -0.79
CHD7-202ENST00000524602 PPP1R9BQ96SB3 815 aa10.15□□□□□ -0.79
CHD7-202ENST00000524602 TAF7Q15545 349 aaPredicted RBP10.14□□□□□ -0.79
CHD7-202ENST00000524602 LMBRD1Q9NUN5 540 aa10.14□□□□□ -0.79
CHD7-202ENST00000524602 MCTP1Q6DN14 999 aa10.14□□□□□ -0.79
CHD7-202ENST00000524602 MED1Q15648 1581 aaPredicted RBP10.13□□□□□ -0.79
CHD7-202ENST00000524602 NASPP49321 788 aaPredicted RBP10.13□□□□□ -0.79
CHD7-202ENST00000524602 NUTM2GQ5VZR2 741 aa10.13□□□□□ -0.79
CHD7-202ENST00000524602 INTS4Q96HW7 963 aaKnown RBP10.13□□□□□ -0.79
CHD7-202ENST00000524602 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
CHD7-202ENST00000524602 NLRP6P59044 892 aa10.13□□□□□ -0.79
CHD7-202ENST00000524602 EXOC6BQ9Y2D4 811 aa10.13□□□□□ -0.79
CHD7-202ENST00000524602 HOXB7P09629 217 aa10.13□□□□□ -0.79
CHD7-202ENST00000524602 LTN1O94822 1766 aa10.13□□□□□ -0.79
CHD7-202ENST00000524602 PHRF1Q9P1Y6 1649 aaKnown RBP10.12□□□□□ -0.79
CHD7-202ENST00000524602 ADGRL3Q9HAR2 1447 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 KDM3BQ7LBC6 1761 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 CUL4AQ13619 759 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 CHMLP26374 656 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 PNMA6EA0A0J9YXQ4 647 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
CHD7-202ENST00000524602 SSH3Q8TE77 659 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
CHD7-202ENST00000524602 CEMIPQ8WUJ3 1361 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 NEK4P51957 841 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 ZSCAN23Q3MJ62 389 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 ZGPATQ8N5A5 531 aaKnown RBP10.11□□□□□ -0.79
CHD7-202ENST00000524602 IL17REQ8NFR9 667 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 TMX3Q96JJ7 454 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 MBD3O95983 291 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 HS1BP3Q53T59 392 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 LMO7Q8WWI1 1683 aa10.11□□□□□ -0.79
CHD7-202ENST00000524602 USP44Q9H0E7 712 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms