RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
CLINT1-208ENST00000524306 TBC1D9Q6ZT07 1266 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
CLINT1-208ENST00000524306 EYA1Q99502 592 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 DDX11L8A8MPP1 907 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 L1TD1Q5T7N2 865 aaKnown RBP6.77□□□□□ -1.33
CLINT1-208ENST00000524306 AHDC1Q5TGY3 1603 aaPredicted RBP6.77□□□□□ -1.33
CLINT1-208ENST00000524306 GNAT3A8MTJ3 354 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 MCM4P33991 863 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 RABEP1Q15276 862 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 CCDC30Q5VVM6 783 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 NGDNQ8NEJ9 315 aaKnown RBP6.77□□□□□ -1.33
CLINT1-208ENST00000524306 SALL3Q9BXA9 1300 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 GNAI3P08754 354 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 SLC26A8Q96RN1 970 aa6.77□□□□□ -1.33
CLINT1-208ENST00000524306 AMPHP49418 695 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 KCNH5Q8NCM2 988 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 IP6K1Q92551 441 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 CPDO75976 1380 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 FSD2A1L4K1 749 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 NPM3O75607 178 aaKnown RBP6.76□□□□□ -1.33
CLINT1-208ENST00000524306 GSPT1P15170 499 aaKnown RBP6.76□□□□□ -1.33
CLINT1-208ENST00000524306 DCTN1Q14203 1278 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 MCM10Q7L590 875 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 SRCIN1Q9C0H9 1055 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 TSPYL4Q9UJ04 414 aa6.76□□□□□ -1.33
CLINT1-208ENST00000524306 K7ELQ4 463 aaPredicted RBP6.75□□□□□ -1.33
CLINT1-208ENST00000524306 RAB3GAP1Q15042 981 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 TAF7Q15545 349 aaPredicted RBP6.75□□□□□ -1.33
CLINT1-208ENST00000524306 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
CLINT1-208ENST00000524306 CASC1Q6TDU7 716 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 C19orf44Q9H6X5 657 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 STAP2Q9UGK3 403 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 WNK3Q9BYP7 1800 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 GNAI2P04899 355 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 SLC4A2P04920 1241 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 STK31Q9BXU1 1019 aa6.75□□□□□ -1.33
CLINT1-208ENST00000524306 MRC1P22897 1456 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 ATP8B2P98198 1209 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 USP26Q9BXU7 913 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 PHF8Q9UPP1 1060 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 TNS3Q68CZ2 1445 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 ELL2O00472 640 aaPredicted RBP6.74□□□□□ -1.33
CLINT1-208ENST00000524306 REC8O95072 547 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 NLRP6P59044 892 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
CLINT1-208ENST00000524306 HEG1Q9ULI3 1381 aa6.74□□□□□ -1.33
CLINT1-208ENST00000524306 CICQ96RK0 1608 aaPredicted RBP6.74□□□□□ -1.33
CLINT1-208ENST00000524306 SCN11AQ9UI33 1791 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 GBP4Q96PP9 640 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 MEIS3Q99687 375 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 PAPPAQ13219 1627 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 MCM2P49736 904 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 ANAPC15P60006 121 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 FLIIQ13045 1269 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 AMOTQ4VCS5 1084 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 IL17REQ8NFR9 667 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 SLKQ9H2G2 1235 aaPredicted RBP6.73□□□□□ -1.33
CLINT1-208ENST00000524306 KLHL34Q8N239 644 aa6.73□□□□□ -1.33
CLINT1-208ENST00000524306 USP42Q9H9J4 1324 aaKnown RBP6.72□□□□□ -1.33
CLINT1-208ENST00000524306 POLA2Q14181 598 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 CADPS2Q86UW7 1296 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 HDAC5Q9UQL6 1122 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 LRP6O75581 1613 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 LTBP4Q8N2S1 1624 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 ERC2O15083 957 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 CYP2E1P05181 493 aaPredicted RBP6.72□□□□□ -1.33
CLINT1-208ENST00000524306 SDSP20132 328 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 PDE1AP54750 535 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 NUCB2P80303 420 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 KRT24Q2M2I5 525 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 ABTB2Q8N961 1025 aa6.72□□□□□ -1.33
CLINT1-208ENST00000524306 LAMB4A4D0S4 1761 aa6.71□□□□□ -1.33
CLINT1-208ENST00000524306 FOXO3O43524 673 aa6.71□□□□□ -1.33
CLINT1-208ENST00000524306 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.33
CLINT1-208ENST00000524306 MTX1Q13505 466 aa6.71□□□□□ -1.33
CLINT1-208ENST00000524306 FAM43AQ8N2R8 423 aa6.71□□□□□ -1.33
CLINT1-208ENST00000524306 TMEM94Q12767 1356 aa6.71□□□□□ -1.34
CLINT1-208ENST00000524306 TRAK2O60296 914 aa6.71□□□□□ -1.34
CLINT1-208ENST00000524306 G2E3Q7L622 706 aa6.71□□□□□ -1.34
CLINT1-208ENST00000524306 LRRCC1Q9C099 1032 aa6.71□□□□□ -1.34
CLINT1-208ENST00000524306 RGPD2P0DJD1 1756 aa6.71□□□□□ -1.34
CLINT1-208ENST00000524306 COL14A1Q05707 1796 aaKnown RBP6.71□□□□□ -1.34
CLINT1-208ENST00000524306 KDM4FA0A1W2PPD8 638 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 EIF4A1P60842 406 aaKnown RBP6.7□□□□□ -1.34
CLINT1-208ENST00000524306 PSME1Q06323 249 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 HSP90AB4PQ58FF6 505 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 TNPO1Q92973 898 aaKnown RBP6.7□□□□□ -1.34
CLINT1-208ENST00000524306 UBR2Q8IWV8 1755 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 ST18O60284 1047 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 MRE11P49959 708 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 PLEKHO1Q53GL0 409 aaPredicted RBP6.7□□□□□ -1.34
CLINT1-208ENST00000524306 ARHGEF25Q86VW2 580 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 NPHP3Q7Z494 1330 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 SHANK3Q9BYB0 1731 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 NWD2Q9ULI1 1742 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms