RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
CCNC-216ENST00000523961 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
CCNC-216ENST00000523961 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
CCNC-216ENST00000523961 KCNQ4P56696 695 aa16.61■□□□□ 0.25
CCNC-216ENST00000523961 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
CCNC-216ENST00000523961 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
CCNC-216ENST00000523961 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
CCNC-216ENST00000523961 SIK1P57059 783 aa16.6■□□□□ 0.25
CCNC-216ENST00000523961 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
CCNC-216ENST00000523961 RTF1Q92541 710 aaKnown RBP16.6■□□□□ 0.25
CCNC-216ENST00000523961 MRC1P22897 1456 aa16.6■□□□□ 0.25
CCNC-216ENST00000523961 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
CCNC-216ENST00000523961 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
CCNC-216ENST00000523961 TEFQ10587 303 aa16.59■□□□□ 0.25
CCNC-216ENST00000523961 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
CCNC-216ENST00000523961 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
CCNC-216ENST00000523961 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
CCNC-216ENST00000523961 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
CCNC-216ENST00000523961 NFE2L2Q16236 605 aa16.57■□□□□ 0.24
CCNC-216ENST00000523961 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
CCNC-216ENST00000523961 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
CCNC-216ENST00000523961 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
CCNC-216ENST00000523961 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
CCNC-216ENST00000523961 TFCP2L1Q9NZI6 479 aa16.55■□□□□ 0.24
CCNC-216ENST00000523961 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
CCNC-216ENST00000523961 MCM10Q7L590 875 aa16.54■□□□□ 0.24
CCNC-216ENST00000523961 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
CCNC-216ENST00000523961 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 ITPK1Q13572 414 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 C5P01031 1676 aa16.53■□□□□ 0.24
CCNC-216ENST00000523961 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
CCNC-216ENST00000523961 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
CCNC-216ENST00000523961 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
CCNC-216ENST00000523961 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.24
CCNC-216ENST00000523961 AK7Q96M32 723 aa16.52■□□□□ 0.24
CCNC-216ENST00000523961 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
CCNC-216ENST00000523961 ZNF831Q5JPB2 1677 aa16.51■□□□□ 0.23
CCNC-216ENST00000523961 RIPK4P57078 832 aa16.51■□□□□ 0.23
CCNC-216ENST00000523961 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
CCNC-216ENST00000523961 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
CCNC-216ENST00000523961 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
CCNC-216ENST00000523961 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
CCNC-216ENST00000523961 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
CCNC-216ENST00000523961 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
CCNC-216ENST00000523961 FLAD1Q8NFF5 587 aa16.5■□□□□ 0.23
CCNC-216ENST00000523961 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
CCNC-216ENST00000523961 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
CCNC-216ENST00000523961 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
CCNC-216ENST00000523961 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
CCNC-216ENST00000523961 SLC16A10Q8TF71 515 aa16.49■□□□□ 0.23
CCNC-216ENST00000523961 SPON1Q9HCB6 807 aa16.49■□□□□ 0.23
CCNC-216ENST00000523961 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
CCNC-216ENST00000523961 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
CCNC-216ENST00000523961 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
CCNC-216ENST00000523961 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
CCNC-216ENST00000523961 QSER1Q2KHR3 1735 aa16.48■□□□□ 0.23
CCNC-216ENST00000523961 KCPQ6ZWJ8 1503 aa16.48■□□□□ 0.23
CCNC-216ENST00000523961 GNPATO15228 680 aa16.47■□□□□ 0.23
CCNC-216ENST00000523961 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
CCNC-216ENST00000523961 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
CCNC-216ENST00000523961 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
CCNC-216ENST00000523961 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
CCNC-216ENST00000523961 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
CCNC-216ENST00000523961 MTFR1LQ9H019 292 aa16.47■□□□□ 0.23
CCNC-216ENST00000523961 RRP7AQ9Y3A4 280 aaKnown RBP16.47■□□□□ 0.23
CCNC-216ENST00000523961 LRP5O75197 1615 aa16.46■□□□□ 0.23
CCNC-216ENST00000523961 SSFA2P28290 1259 aa16.46■□□□□ 0.23
CCNC-216ENST00000523961 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.23
CCNC-216ENST00000523961 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
CCNC-216ENST00000523961 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
CCNC-216ENST00000523961 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
CCNC-216ENST00000523961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
CCNC-216ENST00000523961 KCNQ3O43525 872 aa16.45■□□□□ 0.22
CCNC-216ENST00000523961 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
CCNC-216ENST00000523961 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
CCNC-216ENST00000523961 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
CCNC-216ENST00000523961 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
CCNC-216ENST00000523961 UBR2Q8IWV8 1755 aa16.45■□□□□ 0.22
CCNC-216ENST00000523961 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
CCNC-216ENST00000523961 APAF1O14727 1248 aa16.44■□□□□ 0.22
CCNC-216ENST00000523961 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
CCNC-216ENST00000523961 PHF14O94880 888 aa16.44■□□□□ 0.22
CCNC-216ENST00000523961 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
CCNC-216ENST00000523961 COL5A3P25940 1745 aaPredicted RBP16.44■□□□□ 0.22
CCNC-216ENST00000523961 TJP1Q07157 1748 aa16.44■□□□□ 0.22
CCNC-216ENST00000523961 STARD3NLO95772 234 aa16.43■□□□□ 0.22
CCNC-216ENST00000523961 CYP19A1P11511 503 aaPredicted RBP16.43■□□□□ 0.22
CCNC-216ENST00000523961 AMIGO3Q86WK7 504 aa16.43■□□□□ 0.22
CCNC-216ENST00000523961 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
CCNC-216ENST00000523961 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
CCNC-216ENST00000523961 TRIM35Q9UPQ4 493 aa16.43■□□□□ 0.22
CCNC-216ENST00000523961 UBR3Q6ZT12 1888 aa16.43■□□□□ 0.22
CCNC-216ENST00000523961 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
CCNC-216ENST00000523961 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
CCNC-216ENST00000523961 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
CCNC-216ENST00000523961 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms