RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 H3BM21 787 aa10.84□□□□□ -0.67
SDCBP-210ENST00000522843 VEGFBP49765 207 aa10.84□□□□□ -0.67
SDCBP-210ENST00000522843 BAP1Q92560 729 aa10.84□□□□□ -0.67
SDCBP-210ENST00000522843 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
SDCBP-210ENST00000522843 MROH1Q8NDA8 1641 aa10.84□□□□□ -0.67
SDCBP-210ENST00000522843 CCDC141Q6ZP82 1450 aa10.83□□□□□ -0.68
SDCBP-210ENST00000522843 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
SDCBP-210ENST00000522843 LORP23490 312 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-210ENST00000522843 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-210ENST00000522843 KCNH2Q12809 1159 aa10.83□□□□□ -0.68
SDCBP-210ENST00000522843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
SDCBP-210ENST00000522843 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
SDCBP-210ENST00000522843 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
SDCBP-210ENST00000522843 VARSP26640 1264 aaKnown RBP10.82□□□□□ -0.68
SDCBP-210ENST00000522843 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
SDCBP-210ENST00000522843 MPNDQ8N594 471 aa10.82□□□□□ -0.68
SDCBP-210ENST00000522843 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
SDCBP-210ENST00000522843 JCADQ9P266 1359 aa10.81□□□□□ -0.68
SDCBP-210ENST00000522843 NDUFV2P19404 249 aa10.81□□□□□ -0.68
SDCBP-210ENST00000522843 TRIM52Q96A61 297 aa10.81□□□□□ -0.68
SDCBP-210ENST00000522843 TLL2Q9Y6L7 1015 aa10.81□□□□□ -0.68
SDCBP-210ENST00000522843 PHLPP1O60346 1717 aa10.81□□□□□ -0.68
SDCBP-210ENST00000522843 COL16A1Q07092 1604 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-210ENST00000522843 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
SDCBP-210ENST00000522843 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
SDCBP-210ENST00000522843 PRR7Q8TB68 274 aa10.8□□□□□ -0.68
SDCBP-210ENST00000522843 CAMSAP2Q08AD1 1489 aa10.8□□□□□ -0.68
SDCBP-210ENST00000522843 TET3O43151 1660 aa10.79□□□□□ -0.68
SDCBP-210ENST00000522843 MOXD2PA6NHM9 499 aa10.79□□□□□ -0.68
SDCBP-210ENST00000522843 KCNA6P17658 529 aa10.79□□□□□ -0.68
SDCBP-210ENST00000522843 DESI1Q6ICB0 168 aa10.79□□□□□ -0.68
SDCBP-210ENST00000522843 LRRC9Q6ZRR7 1453 aa10.79□□□□□ -0.68
SDCBP-210ENST00000522843 ERBB4Q15303 1308 aa10.79□□□□□ -0.68
SDCBP-210ENST00000522843 PRDM15P57071 1507 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-210ENST00000522843 CEP152O94986 1710 aa10.78□□□□□ -0.68
SDCBP-210ENST00000522843 CEP162Q5TB80 1403 aa10.78□□□□□ -0.68
SDCBP-210ENST00000522843 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
SDCBP-210ENST00000522843 NNTQ13423 1086 aa10.78□□□□□ -0.68
SDCBP-210ENST00000522843 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
SDCBP-210ENST00000522843 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.68
SDCBP-210ENST00000522843 MTMR2Q13614 643 aa10.77□□□□□ -0.69
SDCBP-210ENST00000522843 SCARF1Q14162 830 aa10.77□□□□□ -0.69
SDCBP-210ENST00000522843 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
SDCBP-210ENST00000522843 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.69
SDCBP-210ENST00000522843 NWD1Q149M9 1564 aa10.77□□□□□ -0.69
SDCBP-210ENST00000522843 PIK3C2BO00750 1634 aa10.76□□□□□ -0.69
SDCBP-210ENST00000522843 SLC26A8Q96RN1 970 aa10.76□□□□□ -0.69
SDCBP-210ENST00000522843 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
SDCBP-210ENST00000522843 ARHGEF5Q12774 1597 aa10.76□□□□□ -0.69
SDCBP-210ENST00000522843 ZNF772Q68DY9 489 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-210ENST00000522843 EIF2AK4Q9P2K8 1649 aaKnown RBP10.74□□□□□ -0.69
SDCBP-210ENST00000522843 ADH1CP00326 375 aa10.74□□□□□ -0.69
SDCBP-210ENST00000522843 TIMP2P16035 220 aa10.74□□□□□ -0.69
SDCBP-210ENST00000522843 WDR4P57081 412 aaKnown RBP10.74□□□□□ -0.69
SDCBP-210ENST00000522843 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
SDCBP-210ENST00000522843 EID1Q9Y6B2 187 aa10.74□□□□□ -0.69
SDCBP-210ENST00000522843 SPATA31A6Q5VVP1 1343 aa10.74□□□□□ -0.69
SDCBP-210ENST00000522843 ARHGAP31Q2M1Z3 1444 aa10.74□□□□□ -0.69
SDCBP-210ENST00000522843 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
SDCBP-210ENST00000522843 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-210ENST00000522843 RXRBP28702 533 aa10.73□□□□□ -0.69
SDCBP-210ENST00000522843 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
SDCBP-210ENST00000522843 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-210ENST00000522843 MSH6P52701 1360 aa10.73□□□□□ -0.69
SDCBP-210ENST00000522843 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
SDCBP-210ENST00000522843 MAST1Q9Y2H9 1570 aa10.73□□□□□ -0.69
SDCBP-210ENST00000522843 TTLL12Q14166 644 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-210ENST00000522843 SHPRHQ149N8 1683 aa10.72□□□□□ -0.69
SDCBP-210ENST00000522843 RGS12O14924 1447 aa10.71□□□□□ -0.69
SDCBP-210ENST00000522843 KDM5AP29375 1690 aaKnown RBP10.71□□□□□ -0.69
SDCBP-210ENST00000522843 CTHP32929 405 aa10.71□□□□□ -0.69
SDCBP-210ENST00000522843 DIP2AQ14689 1571 aa10.71□□□□□ -0.69
SDCBP-210ENST00000522843 AHDC1Q5TGY3 1603 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-210ENST00000522843 EFCAB6Q5THR3 1501 aa10.71□□□□□ -0.69
SDCBP-210ENST00000522843 MEX3CQ5U5Q3 659 aaKnown RBP10.71□□□□□ -0.69
SDCBP-210ENST00000522843 LYPD8Q6UX82 237 aa10.71□□□□□ -0.69
SDCBP-210ENST00000522843 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
SDCBP-210ENST00000522843 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
SDCBP-210ENST00000522843 GJA5P36382 358 aa10.7□□□□□ -0.7
SDCBP-210ENST00000522843 IDI1Q13907 227 aa10.7□□□□□ -0.7
SDCBP-210ENST00000522843 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
SDCBP-210ENST00000522843 SOBPA7XYQ1 873 aa10.69□□□□□ -0.7
SDCBP-210ENST00000522843 CHD2O14647 1828 aaKnown RBP10.68□□□□□ -0.7
SDCBP-210ENST00000522843 AFF2P51816 1311 aa10.68□□□□□ -0.7
SDCBP-210ENST00000522843 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
SDCBP-210ENST00000522843 AMHR2Q16671 573 aa10.68□□□□□ -0.7
SDCBP-210ENST00000522843 BEGAINQ9BUH8 593 aa10.68□□□□□ -0.7
SDCBP-210ENST00000522843 SETBP1Q9Y6X0 1596 aa10.68□□□□□ -0.7
SDCBP-210ENST00000522843 ARID5BQ14865 1188 aa10.67□□□□□ -0.7
SDCBP-210ENST00000522843 DIXDC1Q155Q3 683 aa10.67□□□□□ -0.7
SDCBP-210ENST00000522843 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
SDCBP-210ENST00000522843 BARGINQ6ZT62 677 aa10.67□□□□□ -0.7
SDCBP-210ENST00000522843 FOXJ1Q92949 421 aa10.67□□□□□ -0.7
SDCBP-210ENST00000522843 ZIC2O95409 532 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-210ENST00000522843 ZC3H15Q8WU90 426 aaKnown RBP10.66□□□□□ -0.7
SDCBP-210ENST00000522843 TBC1D2Q9BYX2 928 aa10.66□□□□□ -0.7
SDCBP-210ENST00000522843 DUOX2Q9NRD8 1548 aa10.66□□□□□ -0.7
SDCBP-210ENST00000522843 ADGRB3O60242 1522 aa10.65□□□□□ -0.7
SDCBP-210ENST00000522843 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-210ENST00000522843 NUTM2BA6NNL0 878 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms