RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	METTL24	Q5JXM2	366 aa		12.19	□□□□□ -0.46
TCF7-223	ENST00000522653	URB2	Q14146	1524 aa	Known RBP	12.19	□□□□□ -0.46
TCF7-223	ENST00000522653	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	TRMT112	Q9UI30	125 aa	Known RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	PPP1R12B	O60237	982 aa	Predicted RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	SURF6	O75683	361 aa	Known RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	FOXO3	O43524	673 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	PDC	P20941	246 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	MAP3K12	Q12852	859 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	OTUD7B	Q6GQQ9	843 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	HYPK	Q9NX55	129 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	DHX29	Q7Z478	1369 aa	Known RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	XPC	Q01831	940 aa	Predicted RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	IFIT5	Q13325	482 aa	Known RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	CCDC152	Q4G0S7	254 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	HSP90AB2P	Q58FF8	381 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	ZNF592	Q92610	1267 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	RNF41	Q9H4P4	317 aa	Predicted RBP	12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	BIVM-ERCC5	R4GMW8	1640 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	FCHSD2	O94868	740 aa		12.18	□□□□□ -0.46
TCF7-223	ENST00000522653	ZNF518A	Q6AHZ1	1483 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	BMS1	Q14692	1282 aa	Known RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	NAT10	Q9H0A0	1025 aa	Known RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	ARGLU1	Q9NWB6	273 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	CWC15	Q9P013	229 aa	Known RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	ZSCAN30	Q86W11	494 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	SMC3	Q9UQE7	1217 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	WASL	O00401	505 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	ZNF396	Q96N95	335 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	RAB34	Q9BZG1	259 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	MKNK2	Q9HBH9	465 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	MTMR7	Q9Y216	660 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	MYCN	P04198	464 aa	Predicted RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	RRP12	Q5JTH9	1297 aa	Known RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	ZCRB1	Q8TBF4	217 aa	Known RBP	12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	SH2D4A	Q9H788	454 aa		12.17	□□□□□ -0.46
TCF7-223	ENST00000522653	NCBP1	Q09161	790 aa	Known RBP	12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	ASXL2	Q76L83	1435 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	KIF20A	O95235	890 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	MCM4	P33991	863 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	TTF1	Q15361	905 aa	Predicted RBP	12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	RBM17	Q96I25	401 aa	Known RBP	12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	SLC5A4	Q9NY91	659 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	TPTE2	Q6XPS3	522 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	ZNF804A	Q7Z570	1209 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	NLRP3	Q96P20	1036 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	WDR7	Q9Y4E6	1490 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	SMC2	O95347	1197 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	MYL6B	P14649	208 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	TWISTNB	Q3B726	338 aa	Predicted RBP	12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	DACH1	Q9UI36	760 aa		12.16	□□□□□ -0.46
TCF7-223	ENST00000522653	ZRSR2	Q15696	482 aa	Known RBP	12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	APAF1	O14727	1248 aa		12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	ZBTB24	O43167	697 aa	Predicted RBP	12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	KRT32	Q14532	448 aa		12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	PLCG2	P16885	1265 aa		12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	GRM1	Q13255	1194 aa		12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	CCDC196	A0A1B0GTZ2	297 aa		12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	MCM2	P49736	904 aa		12.15	□□□□□ -0.46
TCF7-223	ENST00000522653	MBD3	O95983	291 aa		12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	CETN2	P41208	172 aa		12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	CEBPA	P49715	358 aa	Predicted RBP	12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	FILIP1L	Q4L180	1135 aa		12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	ARHGEF10	O15013	1369 aa		12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	PCF11	O94913	1555 aa	Known RBP	12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	LRRFIP2	Q9Y608	721 aa	Known RBP	12.14	□□□□□ -0.47
TCF7-223	ENST00000522653	BAG4	O95429	457 aa	Known RBP	12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	IL2RB	P14784	551 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	RXRB	P28702	533 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	TRPC5	Q9UL62	973 aa	Predicted RBP	12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	TAF7	Q15545	349 aa	Predicted RBP	12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	STXBP4	Q6ZWJ1	553 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	LRRC45	Q96CN5	670 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	ANKRD2	Q9GZV1	360 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	NSD2	O96028	1365 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	TRAPPC3L	Q5T215	181 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	IFT57	Q9NWB7	429 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	MAST3	O60307	1309 aa		12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	CAVIN1	Q6NZI2	390 aa	Known RBP	12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	PHAX	Q9H814	394 aa	Known RBP	12.13	□□□□□ -0.47
TCF7-223	ENST00000522653	NCOA1	Q15788	1441 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	UQCRFS1P1	P0C7P4	283 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	CALR	P27797	417 aa	Known RBP	12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	ATP6V1A	P38606	617 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	BICD2	Q8TD16	824 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	CEP131	Q9UPN4	1083 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	EIF4G3	O43432	1585 aa	Known RBP	12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	NAIP	Q13075	1403 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	CLCN1	P35523	988 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	CERS3	Q8IU89	383 aa		12.12	□□□□□ -0.47
TCF7-223	ENST00000522653	CCDC96	Q2M329	555 aa		12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	SMARCE1	Q969G3	411 aa		12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	PTCD1	O75127	700 aa	Known RBP	12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	GCC1	Q96CN9	775 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms