RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TAF7Q15545 349 aaPredicted RBP31.57■■■□□ 2.64
PVT1-212ENST00000521951 TMOD3Q9NYL9 352 aa31.57■■■□□ 2.64
PVT1-212ENST00000521951 PIGBQ92521 554 aa31.55■■■□□ 2.64
PVT1-212ENST00000521951 IL16Q14005 1332 aa31.55■■■□□ 2.64
PVT1-212ENST00000521951 NHSQ6T4R5 1651 aa31.54■■■□□ 2.64
PVT1-212ENST00000521951 LAS1LQ9Y4W2 734 aaKnown RBP31.54■■■□□ 2.64
PVT1-212ENST00000521951 GOLGA2Q08379 1002 aa31.53■■■□□ 2.64
PVT1-212ENST00000521951 PTF1AQ7RTS3 328 aa31.53■■■□□ 2.64
PVT1-212ENST00000521951 ZNF853P0CG23 659 aa31.52■■■□□ 2.64
PVT1-212ENST00000521951 CFAP44Q96MT7 982 aa31.52■■■□□ 2.64
PVT1-212ENST00000521951 SPINK5Q9NQ38 1064 aaPredicted RBP31.52■■■□□ 2.64
PVT1-212ENST00000521951 MIS18AQ9NYP9 233 aa31.52■■■□□ 2.64
PVT1-212ENST00000521951 BTBD11A6QL63 1104 aa31.51■■■□□ 2.63
PVT1-212ENST00000521951 GNAI1P63096 354 aa31.51■■■□□ 2.63
PVT1-212ENST00000521951 IFT57Q9NWB7 429 aa31.51■■■□□ 2.63
PVT1-212ENST00000521951 CHL1O00533 1208 aa31.5■■■□□ 2.63
PVT1-212ENST00000521951 TRIM37O94972 964 aa31.49■■■□□ 2.63
PVT1-212ENST00000521951 BCL11BQ9C0K0 894 aaPredicted RBP31.49■■■□□ 2.63
PVT1-212ENST00000521951 CDCA7LQ96GN5 454 aa31.49■■■□□ 2.63
PVT1-212ENST00000521951 BABAM1Q9NWV8 329 aa31.49■■■□□ 2.63
PVT1-212ENST00000521951 SLC39A6Q13433 755 aa31.47■■■□□ 2.63
PVT1-212ENST00000521951 TSPYL4Q9UJ04 414 aa31.47■■■□□ 2.63
PVT1-212ENST00000521951 BTAF1O14981 1849 aa31.47■■■□□ 2.63
PVT1-212ENST00000521951 EP400Q96L91 3159 aa31.46■■■□□ 2.63
PVT1-212ENST00000521951 KDM3BQ7LBC6 1761 aa31.46■■■□□ 2.63
PVT1-212ENST00000521951 SLFN5Q08AF3 891 aa31.45■■■□□ 2.63
PVT1-212ENST00000521951 MBIPQ9NS73 344 aa31.45■■■□□ 2.63
PVT1-212ENST00000521951 ASAP1Q9ULH1 1129 aa31.45■■■□□ 2.63
PVT1-212ENST00000521951 E9PSI1 815 aa31.44■■■□□ 2.62
PVT1-212ENST00000521951 KCNQ3O43525 872 aa31.44■■■□□ 2.62
PVT1-212ENST00000521951 ATG3Q9NT62 314 aa31.44■■■□□ 2.62
PVT1-212ENST00000521951 ZNF790Q6PG37 636 aa31.44■■■□□ 2.62
PVT1-212ENST00000521951 PAPPAQ13219 1627 aa31.43■■■□□ 2.62
PVT1-212ENST00000521951 TSR2Q969E8 191 aaKnown RBP31.43■■■□□ 2.62
PVT1-212ENST00000521951 MYH16Q9H6N6 1097 aa31.42■■■□□ 2.62
PVT1-212ENST00000521951 TRMT2AQ8IZ69 625 aaKnown RBP31.41■■■□□ 2.62
PVT1-212ENST00000521951 TTC5Q8N0Z6 440 aa31.4■■■□□ 2.62
PVT1-212ENST00000521951 FANCIQ9NVI1 1328 aa31.4■■■□□ 2.62
PVT1-212ENST00000521951 ILDR2Q71H61 639 aa31.39■■■□□ 2.61
PVT1-212ENST00000521951 SMARCC1Q92922 1105 aaPredicted RBP31.38■■■□□ 2.61
PVT1-212ENST00000521951 UBR2Q8IWV8 1755 aa31.37■■■□□ 2.61
PVT1-212ENST00000521951 EIF4A1P60842 406 aaKnown RBP31.37■■■□□ 2.61
PVT1-212ENST00000521951 TNS1Q9HBL0 1735 aaKnown RBP31.37■■■□□ 2.61
PVT1-212ENST00000521951 DUSP27Q5VZP5 1158 aa31.36■■■□□ 2.61
PVT1-212ENST00000521951 ZNF496Q96IT1 587 aaPredicted RBP31.35■■■□□ 2.61
PVT1-212ENST00000521951 PALLDQ8WX93 1383 aa31.35■■■□□ 2.61
PVT1-212ENST00000521951 KCPQ6ZWJ8 1503 aa31.35■■■□□ 2.61
PVT1-212ENST00000521951 PTCD1O75127 700 aaKnown RBP31.34■■■□□ 2.61
PVT1-212ENST00000521951 APBA3O96018 575 aa31.34■■■□□ 2.61
PVT1-212ENST00000521951 FMNL2Q96PY5 1086 aa31.34■■■□□ 2.61
PVT1-212ENST00000521951 RBM42Q9BTD8 480 aaKnown RBP31.33■■■□□ 2.61
PVT1-212ENST00000521951 KRT24Q2M2I5 525 aa31.32■■■□□ 2.6
PVT1-212ENST00000521951 EXOSC9Q06265 439 aaKnown RBP31.31■■■□□ 2.6
PVT1-212ENST00000521951 HEG1Q9ULI3 1381 aa31.31■■■□□ 2.6
PVT1-212ENST00000521951 C8orf58Q8NAV2 365 aa31.29■■■□□ 2.6
PVT1-212ENST00000521951 SLC4A9Q96Q91 983 aa31.29■■■□□ 2.6
PVT1-212ENST00000521951 LY75O60449 1722 aa31.29■■■□□ 2.6
PVT1-212ENST00000521951 PLSCR1O15162 318 aa31.29■■■□□ 2.6
PVT1-212ENST00000521951 LOC102724428A0A0B4J2F2 783 aa31.28■■■□□ 2.6
PVT1-212ENST00000521951 SIK1P57059 783 aa31.28■■■□□ 2.6
PVT1-212ENST00000521951 SF3B2Q13435 895 aaKnown RBP31.27■■■□□ 2.6
PVT1-212ENST00000521951 CCDC125Q86Z20 511 aa31.27■■■□□ 2.6
PVT1-212ENST00000521951 ELL2O00472 640 aaPredicted RBP31.26■■■□□ 2.59
PVT1-212ENST00000521951 GIGYF1O75420 1035 aaPredicted RBP31.26■■■□□ 2.59
PVT1-212ENST00000521951 VSIG10Q8N0Z9 540 aa31.26■■■□□ 2.59
PVT1-212ENST00000521951 TSPYL6Q8N831 410 aa31.26■■■□□ 2.59
PVT1-212ENST00000521951 SNRPA1P09661 255 aaKnown RBP31.25■■■□□ 2.59
PVT1-212ENST00000521951 PRAMEF22A3QJZ6 481 aa31.24■■■□□ 2.59
PVT1-212ENST00000521951 ATP6V1AP38606 617 aa31.24■■■□□ 2.59
PVT1-212ENST00000521951 UPF1Q92900 1129 aaKnown RBP eCLIP31.23■■■□□ 2.59
PVT1-212ENST00000521951 C5P01031 1676 aa31.22■■■□□ 2.59
PVT1-212ENST00000521951 ZNF831Q5JPB2 1677 aa31.22■■■□□ 2.59
PVT1-212ENST00000521951 TWISTNBQ3B726 338 aaPredicted RBP31.22■■■□□ 2.59
PVT1-212ENST00000521951 KCNQ4P56696 695 aa31.21■■■□□ 2.59
PVT1-212ENST00000521951 DNAJC10Q8IXB1 793 aa31.21■■■□□ 2.59
PVT1-212ENST00000521951 PROM2Q8N271 834 aa31.21■■■□□ 2.59
PVT1-212ENST00000521951 CCNL1Q9UK58 526 aaPredicted RBP31.21■■■□□ 2.59
PVT1-212ENST00000521951 TJP1Q07157 1748 aa31.21■■■□□ 2.59
PVT1-212ENST00000521951 RGPD3A6NKT7 1758 aaPredicted RBP31.2■■■□□ 2.59
PVT1-212ENST00000521951 RGPD4Q7Z3J3 1758 aa31.2■■■□□ 2.59
PVT1-212ENST00000521951 HOXB7P09629 217 aa31.2■■■□□ 2.59
PVT1-212ENST00000521951 BAG6P46379 1132 aa31.2■■■□□ 2.59
PVT1-212ENST00000521951 ITPK1Q13572 414 aa31.2■■■□□ 2.59
PVT1-212ENST00000521951 TXNRD1Q16881 649 aa31.2■■■□□ 2.59
PVT1-212ENST00000521951 USP16Q9Y5T5 823 aa31.2■■■□□ 2.59
PVT1-212ENST00000521951 VAMP4O75379 141 aa31.19■■■□□ 2.58
PVT1-212ENST00000521951 EN1Q05925 392 aaPredicted RBP31.19■■■□□ 2.58
PVT1-212ENST00000521951 TEX13AQ9BXU3 409 aaPredicted RBP31.19■■■□□ 2.58
PVT1-212ENST00000521951 CAMKK2Q96RR4 588 aa31.19■■■□□ 2.58
PVT1-212ENST00000521951 SOS1Q07889 1333 aaPredicted RBP31.18■■■□□ 2.58
PVT1-212ENST00000521951 CICQ96RK0 1608 aaPredicted RBP31.18■■■□□ 2.58
PVT1-212ENST00000521951 SLC27A3Q5K4L6 730 aa31.18■■■□□ 2.58
PVT1-212ENST00000521951 DEFB132Q7Z7B7 95 aa31.18■■■□□ 2.58
PVT1-212ENST00000521951 LRRC4BQ9NT99 713 aa31.18■■■□□ 2.58
PVT1-212ENST00000521951 LAMB4A4D0S4 1761 aa31.16■■■□□ 2.58
PVT1-212ENST00000521951 EIF2S2P20042 333 aaKnown RBP31.15■■■□□ 2.58
PVT1-212ENST00000521951 EZH2Q15910 746 aaKnown RBP31.15■■■□□ 2.58
PVT1-212ENST00000521951 TAF1LQ8IZX4 1826 aa31.15■■■□□ 2.58
PVT1-212ENST00000521951 CT47B1P0C2W7 299 aaPredicted RBP31.14■■■□□ 2.58
PVT1-212ENST00000521951 CYP19A1P11511 503 aaPredicted RBP31.14■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms