RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	LGR6	Q9HBX8	967 aa		11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ATG3	Q9NT62	314 aa		11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	TFCP2L1	Q9NZI6	479 aa		11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ADAMTS7	Q9UKP4	1686 aa		11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	MRC1	P22897	1456 aa		11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	DLG5	Q8TDM6	1919 aa		11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	LOC102724428	A0A0B4J2F2	783 aa		11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	MSH5	O43196	834 aa		11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SIK1	P57059	783 aa		11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.14	□□□□□ -0.63
CTNNA1-231	ENST00000521941	GNAT3	A8MTJ3	354 aa		11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	PTCD1	O75127	700 aa	Known RBP	11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	NEFM	P07197	916 aa		11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	ATP6V1A	P38606	617 aa		11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	AKT1S1	Q96B36	256 aa		11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	AK7	Q96M32	723 aa		11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SLC52A2	Q9HAB3	445 aa		11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.13	□□□□□ -0.63
CTNNA1-231	ENST00000521941	PNPLA7	Q6ZV29	1317 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	FCHSD2	O94868	740 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	PHF14	O94880	888 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	TEF	Q10587	303 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SLC39A6	Q13433	755 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	LINC00116	Q8NCU8	138 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SPON1	Q9HCB6	807 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SIPA1L3	O60292	1781 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	UBR3	Q6ZT12	1888 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	COL5A3	P25940	1745 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	TJP1	Q07157	1748 aa		11.12	□□□□□ -0.63
CTNNA1-231	ENST00000521941	MAPK8IP3	Q9UPT6	1336 aa		11.11	□□□□□ -0.63
CTNNA1-231	ENST00000521941	ITPK1	Q13572	414 aa		11.11	□□□□□ -0.63
CTNNA1-231	ENST00000521941	WDR43	Q15061	677 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SMIM5	Q71RC9	77 aa		11.11	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SRCAP	Q6ZRS2	3230 aa		11.11	□□□□□ -0.63
CTNNA1-231	ENST00000521941	DCTN1	Q14203	1278 aa		11.1	□□□□□ -0.63
CTNNA1-231	ENST00000521941	MCM10	Q7L590	875 aa		11.1	□□□□□ -0.63
CTNNA1-231	ENST00000521941	RTF1	Q92541	710 aa	Known RBP	11.1	□□□□□ -0.63
CTNNA1-231	ENST00000521941	SLC4A9	Q96Q91	983 aa		11.1	□□□□□ -0.63
CTNNA1-231	ENST00000521941	UBR2	Q8IWV8	1755 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	ZNF831	Q5JPB2	1677 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	GNPAT	O15228	680 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	MSL1	Q68DK7	614 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	CCDC146	Q8IYE0	955 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	IL17RE	Q8NFR9	667 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	MTFR1L	Q9H019	292 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	KCP	Q6ZWJ8	1503 aa		11.09	□□□□□ -0.63
CTNNA1-231	ENST00000521941	ANP32C	O43423	234 aa		11.08	□□□□□ -0.64
CTNNA1-231	ENST00000521941	AMIGO3	Q86WK7	504 aa		11.08	□□□□□ -0.64
CTNNA1-231	ENST00000521941	COL23A1	Q86Y22	540 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNNA1-231	ENST00000521941	TTC5	Q8N0Z6	440 aa		11.08	□□□□□ -0.64
CTNNA1-231	ENST00000521941	MYH14	Q7Z406	1995 aa	Known RBP	11.07	□□□□□ -0.64
CTNNA1-231	ENST00000521941	CIC	Q96RK0	1608 aa	Predicted RBP	11.07	□□□□□ -0.64
CTNNA1-231	ENST00000521941	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.07	□□□□□ -0.64
CTNNA1-231	ENST00000521941	KLHL34	Q8N239	644 aa		11.07	□□□□□ -0.64
CTNNA1-231	ENST00000521941	PLEKHF1	Q96S99	279 aa		11.07	□□□□□ -0.64
CTNNA1-231	ENST00000521941	PNN	Q9H307	717 aa	Known RBP	11.07	□□□□□ -0.64
CTNNA1-231	ENST00000521941	C4A	P0C0L4	1744 aa		11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	CEMIP	Q8WUJ3	1361 aa		11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	BTBD11	A6QL63	1104 aa		11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	HMGB2	P26583	209 aa	Known RBP	11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	NFE2L2	Q16236	605 aa		11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	DNAJC10	Q8IXB1	793 aa		11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	THUMPD2	Q9BTF0	503 aa	Known RBP	11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	RRP7A	Q9Y3A4	280 aa	Known RBP	11.06	□□□□□ -0.64
CTNNA1-231	ENST00000521941	PTGER2	P43116	358 aa		11.05	□□□□□ -0.64
CTNNA1-231	ENST00000521941	CRKL	P46109	303 aa	Known RBP	11.05	□□□□□ -0.64
CTNNA1-231	ENST00000521941	NEUROD2	Q15784	382 aa		11.05	□□□□□ -0.64
CTNNA1-231	ENST00000521941	CCDC184	Q52MB2	194 aa		11.05	□□□□□ -0.64
CTNNA1-231	ENST00000521941	RTCB	Q9Y3I0	505 aa	Known RBP	11.05	□□□□□ -0.64
CTNNA1-231	ENST00000521941	CNTNAP4	Q9C0A0	1308 aa		11.05	□□□□□ -0.64
CTNNA1-231	ENST00000521941	KCNQ3	O43525	872 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	SSFA2	P28290	1259 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	POLD1	P28340	1107 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	ZNF790	Q6PG37	636 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	FLAD1	Q8NFF5	587 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	SLC16A10	Q8TF71	515 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	ADAMTS8	Q9UP79	889 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	COL24A1	Q17RW2	1714 aa		11.04	□□□□□ -0.64
CTNNA1-231	ENST00000521941	HEG1	Q9ULI3	1381 aa		11.03	□□□□□ -0.64
CTNNA1-231	ENST00000521941	KDM3B	Q7LBC6	1761 aa		11.03	□□□□□ -0.64
CTNNA1-231	ENST00000521941	RIPK4	P57078	832 aa		11.03	□□□□□ -0.64
CTNNA1-231	ENST00000521941	ZNF496	Q96IT1	587 aa	Predicted RBP	11.03	□□□□□ -0.64
CTNNA1-231	ENST00000521941	MRS2	Q9HD23	443 aa		11.03	□□□□□ -0.64
CTNNA1-231	ENST00000521941	MIS18A	Q9NYP9	233 aa		11.03	□□□□□ -0.64
CTNNA1-231	ENST00000521941	SENP3-EIF4A1	A0A087X0R7	540 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	HTATSF1	O43719	755 aa	Known RBP	11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	TMPO	P42166	694 aa	Known RBP	11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	RUNDC1	Q96C34	613 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	FMNL2	Q96PY5	1086 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	ARX	Q96QS3	562 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	SGIP1	Q9BQI5	828 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	CCDC87	Q9NVE4	849 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	ZBTB1	Q9Y2K1	713 aa		11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.02	□□□□□ -0.65
CTNNA1-231	ENST00000521941	LAMB4	A4D0S4	1761 aa		11.01	□□□□□ -0.65
CTNNA1-231	ENST00000521941	RPS6KA4	O75676	772 aa		11.01	□□□□□ -0.65
CTNNA1-231	ENST00000521941	CYP19A1	P11511	503 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNNA1-231	ENST00000521941	CANX	P27824	592 aa	Known RBP	11.01	□□□□□ -0.65

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