RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ALS2Q96Q42 1657 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 USP31Q70CQ4 1352 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 SPATA31A6Q5VVP1 1343 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 FYB1O15117 783 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 NLRP13Q86W25 1043 aa11.46□□□□□ -0.57
VPS13B-210ENST00000521932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.57
VPS13B-210ENST00000521932 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
VPS13B-210ENST00000521932 HCSTQ9UBK5 93 aa11.45□□□□□ -0.58
VPS13B-210ENST00000521932 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
VPS13B-210ENST00000521932 NSD3Q9BZ95 1437 aa11.44□□□□□ -0.58
VPS13B-210ENST00000521932 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
VPS13B-210ENST00000521932 NME9Q86XW9 330 aa11.44□□□□□ -0.58
VPS13B-210ENST00000521932 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
VPS13B-210ENST00000521932 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
VPS13B-210ENST00000521932 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
VPS13B-210ENST00000521932 COL22A1Q8NFW1 1626 aaPredicted RBP11.44□□□□□ -0.58
VPS13B-210ENST00000521932 USP19O94966 1318 aa11.43□□□□□ -0.58
VPS13B-210ENST00000521932 CGNL1Q0VF96 1302 aa11.43□□□□□ -0.58
VPS13B-210ENST00000521932 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-210ENST00000521932 GCP02774 474 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
VPS13B-210ENST00000521932 NUTM2GQ5VZR2 741 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 THSD4Q6ZMP0 1018 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 WNT2BQ93097 391 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-210ENST00000521932 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 OVOS2A0A0J9YW53 1432 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 OVOS2Q6IE36 1432 aa11.42□□□□□ -0.58
VPS13B-210ENST00000521932 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
VPS13B-210ENST00000521932 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
VPS13B-210ENST00000521932 COG3Q96JB2 828 aa11.41□□□□□ -0.58
VPS13B-210ENST00000521932 GGNBP2Q9H3C7 697 aa11.41□□□□□ -0.58
VPS13B-210ENST00000521932 NSD2O96028 1365 aa11.41□□□□□ -0.58
VPS13B-210ENST00000521932 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
VPS13B-210ENST00000521932 USP54Q70EL1 1684 aa11.4□□□□□ -0.58
VPS13B-210ENST00000521932 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
VPS13B-210ENST00000521932 PTPN5P54829 565 aa11.39□□□□□ -0.59
VPS13B-210ENST00000521932 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
VPS13B-210ENST00000521932 SLIT3O75094 1523 aa11.39□□□□□ -0.59
VPS13B-210ENST00000521932 CRYBG1Q9Y4K1 1723 aa11.38□□□□□ -0.59
VPS13B-210ENST00000521932 NUTM2BA6NNL0 878 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-210ENST00000521932 NUTM2EB1AL46 878 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-210ENST00000521932 SEMA3EO15041 775 aa11.38□□□□□ -0.59
VPS13B-210ENST00000521932 PRSS12P56730 875 aa11.38□□□□□ -0.59
VPS13B-210ENST00000521932 NUTM2AQ8IVF1 878 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-210ENST00000521932 CPDO75976 1380 aa11.38□□□□□ -0.59
VPS13B-210ENST00000521932 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
VPS13B-210ENST00000521932 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
VPS13B-210ENST00000521932 LAPTM4BQ86VI4 370 aa11.37□□□□□ -0.59
VPS13B-210ENST00000521932 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
VPS13B-210ENST00000521932 LRP6O75581 1613 aa11.37□□□□□ -0.59
VPS13B-210ENST00000521932 FAM83GA6ND36 823 aa11.36□□□□□ -0.59
VPS13B-210ENST00000521932 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
VPS13B-210ENST00000521932 ZC3H6P61129 1189 aaKnown RBP11.36□□□□□ -0.59
VPS13B-210ENST00000521932 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
VPS13B-210ENST00000521932 AATKQ6ZMQ8 1374 aa11.36□□□□□ -0.59
VPS13B-210ENST00000521932 PHRF1Q9P1Y6 1649 aaKnown RBP11.35□□□□□ -0.59
VPS13B-210ENST00000521932 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
VPS13B-210ENST00000521932 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
VPS13B-210ENST00000521932 BCAMP50895 628 aa11.35□□□□□ -0.59
VPS13B-210ENST00000521932 CC2D1BQ5T0F9 858 aaKnown RBP11.35□□□□□ -0.59
VPS13B-210ENST00000521932 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
VPS13B-210ENST00000521932 FNBP4Q8N3X1 1017 aaPredicted RBP11.35□□□□□ -0.59
VPS13B-210ENST00000521932 NFAT5O94916 1531 aa11.35□□□□□ -0.59
VPS13B-210ENST00000521932 KIAA0232Q92628 1395 aa11.34□□□□□ -0.59
VPS13B-210ENST00000521932 SMAPO00193 183 aa11.34□□□□□ -0.59
VPS13B-210ENST00000521932 FBLN1P23142 703 aa11.34□□□□□ -0.59
VPS13B-210ENST00000521932 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
VPS13B-210ENST00000521932 TTC13Q8NBP0 860 aa11.33□□□□□ -0.6
VPS13B-210ENST00000521932 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
VPS13B-210ENST00000521932 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
VPS13B-210ENST00000521932 ANKRD26Q9UPS8 1709 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 KIF24Q5T7B8 1368 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
VPS13B-210ENST00000521932 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 IP6K1Q92551 441 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 NGLY1Q96IV0 654 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 C8orf37Q96NL8 207 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 POLKQ9UBT6 870 aa11.32□□□□□ -0.6
VPS13B-210ENST00000521932 SLIT2O94813 1529 aa11.31□□□□□ -0.6
VPS13B-210ENST00000521932 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
VPS13B-210ENST00000521932 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
VPS13B-210ENST00000521932 RALBP1Q15311 655 aa11.31□□□□□ -0.6
VPS13B-210ENST00000521932 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
VPS13B-210ENST00000521932 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
VPS13B-210ENST00000521932 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
VPS13B-210ENST00000521932 HOXC9P31274 260 aa11.3□□□□□ -0.6
VPS13B-210ENST00000521932 TNNT2P45379 298 aaPredicted RBP11.3□□□□□ -0.6
VPS13B-210ENST00000521932 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
VPS13B-210ENST00000521932 BTG4Q9NY30 223 aa11.3□□□□□ -0.6
VPS13B-210ENST00000521932 BCL9LQ86UU0 1499 aa11.3□□□□□ -0.6
VPS13B-210ENST00000521932 ABCC6O95255 1503 aa11.3□□□□□ -0.6
VPS13B-210ENST00000521932 COL18A1P39060 1754 aa11.29□□□□□ -0.6
VPS13B-210ENST00000521932 COL14A1Q05707 1796 aaKnown RBP11.29□□□□□ -0.6
VPS13B-210ENST00000521932 AMPHP49418 695 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms