RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 IL16Q14005 1332 aa19.17■□□□□ 0.66
USP42-207ENST00000521713 ESPNB1AK53 854 aa19.17■□□□□ 0.66
USP42-207ENST00000521713 TSPY26PQ9H489 355 aa19.17■□□□□ 0.66
USP42-207ENST00000521713 PODXL2Q9NZ53 605 aa19.17■□□□□ 0.66
USP42-207ENST00000521713 TDO2P48775 406 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 GRPEL1Q9HAV7 217 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 RUFY1Q96T51 708 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 ATP10AO60312 1499 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
USP42-207ENST00000521713 SNRPA1P09661 255 aaKnown RBP19.16■□□□□ 0.66
USP42-207ENST00000521713 SDF4Q9BRK5 362 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 EXOC6BQ9Y2D4 811 aa19.16■□□□□ 0.66
USP42-207ENST00000521713 IDH1O75874 414 aaKnown RBP19.15■□□□□ 0.66
USP42-207ENST00000521713 NKTRP30414 1462 aaKnown RBP19.15■□□□□ 0.66
USP42-207ENST00000521713 ZSCAN29Q8IWY8 852 aaPredicted RBP19.15■□□□□ 0.66
USP42-207ENST00000521713 ZCRB1Q8TBF4 217 aaKnown RBP19.15■□□□□ 0.66
USP42-207ENST00000521713 A0A087WZG4 1122 aa19.15■□□□□ 0.66
USP42-207ENST00000521713 FLIIQ13045 1269 aa19.15■□□□□ 0.66
USP42-207ENST00000521713 BLOC1S2Q6QNY1 142 aa19.15■□□□□ 0.66
USP42-207ENST00000521713 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.14■□□□□ 0.66
USP42-207ENST00000521713 CCDC69A6NI79 296 aa19.14■□□□□ 0.66
USP42-207ENST00000521713 TXLNAP40222 546 aa19.14■□□□□ 0.65
USP42-207ENST00000521713 HSPA2P54652 639 aa19.14■□□□□ 0.65
USP42-207ENST00000521713 HSP90AB2PQ58FF8 381 aa19.14■□□□□ 0.65
USP42-207ENST00000521713 CAVIN1Q6NZI2 390 aaKnown RBP19.14■□□□□ 0.65
USP42-207ENST00000521713 ZNF396Q96N95 335 aaPredicted RBP19.14■□□□□ 0.65
USP42-207ENST00000521713 ABCF2Q9UG63 623 aa19.14■□□□□ 0.65
USP42-207ENST00000521713 AIDAQ96BJ3 306 aa19.13■□□□□ 0.65
USP42-207ENST00000521713 UBAC1Q9BSL1 405 aa19.13■□□□□ 0.65
USP42-207ENST00000521713 ANKRD18BA2A2Z9 1011 aa19.13■□□□□ 0.65
USP42-207ENST00000521713 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
USP42-207ENST00000521713 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
USP42-207ENST00000521713 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
USP42-207ENST00000521713 ATP2B1P20020 1258 aa19.12■□□□□ 0.65
USP42-207ENST00000521713 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
USP42-207ENST00000521713 NCKAP5LQ9HCH0 1330 aa19.12■□□□□ 0.65
USP42-207ENST00000521713 CDKL5O76039 1030 aa19.12■□□□□ 0.65
USP42-207ENST00000521713 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
USP42-207ENST00000521713 LRRC59Q96AG4 307 aaKnown RBP19.12■□□□□ 0.65
USP42-207ENST00000521713 AEBP1Q8IUX7 1158 aa19.11■□□□□ 0.65
USP42-207ENST00000521713 KCNA6P17658 529 aa19.11■□□□□ 0.65
USP42-207ENST00000521713 SOGA3Q5TF21 947 aa19.11■□□□□ 0.65
USP42-207ENST00000521713 PDCL2Q8N4E4 241 aa19.11■□□□□ 0.65
USP42-207ENST00000521713 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
USP42-207ENST00000521713 MX1P20591 662 aa19.11■□□□□ 0.65
USP42-207ENST00000521713 ZBTB3Q9H5J0 574 aa19.11■□□□□ 0.65
USP42-207ENST00000521713 CWC27Q6UX04 472 aaKnown RBP19.1■□□□□ 0.65
USP42-207ENST00000521713 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 SLC5A1P13866 664 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 LEKR1Q6ZMV7 388 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 PPP1R42Q7Z4L9 355 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 CDK5RAP3Q96JB5 506 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 F6X3S4 739 aa19.1■□□□□ 0.65
USP42-207ENST00000521713 TRPM2O94759 1503 aa19.09■□□□□ 0.65
USP42-207ENST00000521713 PDE4CQ08493 712 aa19.09■□□□□ 0.65
USP42-207ENST00000521713 ZSCAN31Q96LW9 406 aaPredicted RBP19.09■□□□□ 0.65
USP42-207ENST00000521713 CDC5LQ99459 802 aaKnown RBP19.09■□□□□ 0.65
USP42-207ENST00000521713 IMMTQ16891 758 aaKnown RBP19.09■□□□□ 0.65
USP42-207ENST00000521713 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
USP42-207ENST00000521713 CWC25Q9NXE8 425 aaPredicted RBP19.09■□□□□ 0.65
USP42-207ENST00000521713 UHRF1BP1Q6BDS2 1440 aa19.09■□□□□ 0.65
USP42-207ENST00000521713 RDXP35241 583 aaKnown RBP19.09■□□□□ 0.65
USP42-207ENST00000521713 STK38Q15208 465 aa19.09■□□□□ 0.65
USP42-207ENST00000521713 KINO60870 393 aaKnown RBP19.09■□□□□ 0.65
USP42-207ENST00000521713 FLT4P35916 1363 aa19.08■□□□□ 0.65
USP42-207ENST00000521713 AKAP4Q5JQC9 854 aa19.08■□□□□ 0.65
USP42-207ENST00000521713 RBM10P98175 930 aaKnown RBP19.08■□□□□ 0.64
USP42-207ENST00000521713 MAP3K12Q12852 859 aa19.08■□□□□ 0.64
USP42-207ENST00000521713 DDB1Q16531 1140 aa19.08■□□□□ 0.64
USP42-207ENST00000521713 BCL11BQ9C0K0 894 aaPredicted RBP19.08■□□□□ 0.64
USP42-207ENST00000521713 MBIPQ9NS73 344 aa19.08■□□□□ 0.64
USP42-207ENST00000521713 KDM4AO75164 1064 aa19.08■□□□□ 0.64
USP42-207ENST00000521713 RNF214Q8ND24 703 aa19.08■□□□□ 0.64
USP42-207ENST00000521713 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
USP42-207ENST00000521713 UQCRHLA0A096LP55 91 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 UQCRHP07919 91 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 PDIA4P13667 645 aaKnown RBP19.07■□□□□ 0.64
USP42-207ENST00000521713 GPTP24298 496 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 ZSCAN30Q86W11 494 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
USP42-207ENST00000521713 MAP3K2Q9Y2U5 619 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
USP42-207ENST00000521713 ASXL1Q8IXJ9 1541 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 NEO1Q92859 1461 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 RFC4P35249 363 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 NPATQ14207 1427 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 SLF2Q8IX21 1173 aa19.07■□□□□ 0.64
USP42-207ENST00000521713 H0YHG0 523 aa19.06■□□□□ 0.64
USP42-207ENST00000521713 MCM4P33991 863 aa19.06■□□□□ 0.64
USP42-207ENST00000521713 TRIM5Q9C035 493 aa19.06■□□□□ 0.64
USP42-207ENST00000521713 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
USP42-207ENST00000521713 STK11IPQ8N1F8 1099 aa19.06■□□□□ 0.64
USP42-207ENST00000521713 IL2RBP14784 551 aa19.06■□□□□ 0.64
USP42-207ENST00000521713 JAKMIP1Q96N16 626 aaKnown RBP19.05■□□□□ 0.64
USP42-207ENST00000521713 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms