RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 C9orf78Q9NZ63 289 aaPredicted RBP21.39■■□□□ 1.02
TRAM1-205ENST00000521425 CWF19L2Q2TBE0 894 aaKnown RBP21.39■■□□□ 1.01
TRAM1-205ENST00000521425 PTPRUQ92729 1446 aa21.39■■□□□ 1.01
TRAM1-205ENST00000521425 HSPA2P54652 639 aa21.39■■□□□ 1.01
TRAM1-205ENST00000521425 TRIM44Q96DX7 344 aaPredicted RBP21.39■■□□□ 1.01
TRAM1-205ENST00000521425 CHMP3Q9Y3E7 222 aa21.39■■□□□ 1.01
TRAM1-205ENST00000521425 PDE4CQ08493 712 aa21.38■■□□□ 1.01
TRAM1-205ENST00000521425 C1orf141Q5JVX7 400 aa21.38■■□□□ 1.01
TRAM1-205ENST00000521425 ARHGAP45Q92619 1136 aa21.38■■□□□ 1.01
TRAM1-205ENST00000521425 DDX49Q9Y6V7 483 aaKnown RBP21.38■■□□□ 1.01
TRAM1-205ENST00000521425 CLCN1P35523 988 aa21.37■■□□□ 1.01
TRAM1-205ENST00000521425 UNC5CLQ8IV45 518 aa21.37■■□□□ 1.01
TRAM1-205ENST00000521425 KLHDC4Q8TBB5 520 aa21.37■■□□□ 1.01
TRAM1-205ENST00000521425 USP6P35125 1406 aa21.37■■□□□ 1.01
TRAM1-205ENST00000521425 K7ELQ4 463 aaPredicted RBP21.36■■□□□ 1.01
TRAM1-205ENST00000521425 INTS3Q68E01 1043 aaKnown RBP21.36■■□□□ 1.01
TRAM1-205ENST00000521425 CPA1P15085 419 aa21.36■■□□□ 1.01
TRAM1-205ENST00000521425 PPP1R42Q7Z4L9 355 aa21.36■■□□□ 1.01
TRAM1-205ENST00000521425 GDPD2Q9HCC8 539 aa21.36■■□□□ 1.01
TRAM1-205ENST00000521425 LRRCC1Q9C099 1032 aa21.35■■□□□ 1.01
TRAM1-205ENST00000521425 FAM13BQ9NYF5 915 aa21.35■■□□□ 1.01
TRAM1-205ENST00000521425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.35■■□□□ 1.01
TRAM1-205ENST00000521425 PROSER3Q2NL68 480 aa21.35■■□□□ 1.01
TRAM1-205ENST00000521425 FLT4P35916 1363 aa21.35■■□□□ 1.01
TRAM1-205ENST00000521425 DIP2BQ9P265 1576 aa21.35■■□□□ 1.01
TRAM1-205ENST00000521425 RPAP2Q8IXW5 612 aaPredicted RBP21.34■■□□□ 1.01
TRAM1-205ENST00000521425 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
TRAM1-205ENST00000521425 ADAMTS13Q76LX8 1427 aa21.34■■□□□ 1.01
TRAM1-205ENST00000521425 PDE1AP54750 535 aa21.34■■□□□ 1.01
TRAM1-205ENST00000521425 ZHX1Q9UKY1 873 aaPredicted RBP21.34■■□□□ 1.01
TRAM1-205ENST00000521425 TBX22Q9Y458 520 aa21.34■■□□□ 1.01
TRAM1-205ENST00000521425 ATP7BP35670 1465 aa21.34■■□□□ 1.01
TRAM1-205ENST00000521425 CWC27Q6UX04 472 aaKnown RBP21.34■■□□□ 1.01
TRAM1-205ENST00000521425 PRDM10Q9NQV6 1147 aa21.33■■□□□ 1.01
TRAM1-205ENST00000521425 NDUFB9Q9Y6M9 179 aa21.33■■□□□ 1.01
TRAM1-205ENST00000521425 RTL1A6NKG5 1358 aa21.33■■□□□ 1.01
TRAM1-205ENST00000521425 PPFIA3O75145 1194 aa21.33■■□□□ 1.01
TRAM1-205ENST00000521425 FGD1P98174 961 aa21.33■■□□□ 1.01
TRAM1-205ENST00000521425 CCDC85AQ96PX6 553 aaPredicted RBP21.33■■□□□ 1.01
TRAM1-205ENST00000521425 KCNJ4P48050 445 aa21.33■■□□□ 1
TRAM1-205ENST00000521425 KIF2CQ99661 725 aa21.33■■□□□ 1
TRAM1-205ENST00000521425 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
TRAM1-205ENST00000521425 SRCIN1Q9C0H9 1055 aa21.31■■□□□ 1
TRAM1-205ENST00000521425 PRPF40AO75400 957 aaKnown RBP21.31■■□□□ 1
TRAM1-205ENST00000521425 AXIN2Q9Y2T1 843 aa21.31■■□□□ 1
TRAM1-205ENST00000521425 GCP02774 474 aa21.31■■□□□ 1
TRAM1-205ENST00000521425 MX1P20591 662 aa21.31■■□□□ 1
TRAM1-205ENST00000521425 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
TRAM1-205ENST00000521425 CAVIN1Q6NZI2 390 aaKnown RBP21.31■■□□□ 1
TRAM1-205ENST00000521425 PALD1Q9ULE6 856 aa21.3■■□□□ 1
TRAM1-205ENST00000521425 ESPNB1AK53 854 aa21.3■■□□□ 1
TRAM1-205ENST00000521425 TCEANC2Q96MN5 208 aa21.3■■□□□ 1
TRAM1-205ENST00000521425 GBP4Q96PP9 640 aa21.3■■□□□ 1
TRAM1-205ENST00000521425 ANKRD24Q8TF21 1146 aa21.29■■□□□ 1
TRAM1-205ENST00000521425 USP44Q9H0E7 712 aa21.29■■□□□ 1
TRAM1-205ENST00000521425 CCDC8Q9H0W5 538 aaPredicted RBP21.29■■□□□ 1
TRAM1-205ENST00000521425 PLCB2Q00722 1185 aa21.29■■□□□ 1
TRAM1-205ENST00000521425 RNF214Q8ND24 703 aa21.29■■□□□ 1
TRAM1-205ENST00000521425 RBM27Q9P2N5 1060 aaKnown RBP21.29■■□□□ 1
TRAM1-205ENST00000521425 PIK3R4Q99570 1358 aa21.28■■□□□ 1
TRAM1-205ENST00000521425 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
TRAM1-205ENST00000521425 ATP5J2-PTCD1G3V325 749 aa21.28■■□□□ 1
TRAM1-205ENST00000521425 PTCD1O75127 700 aaKnown RBP21.28■■□□□ 1
TRAM1-205ENST00000521425 MAP3K2Q9Y2U5 619 aa21.28■■□□□ 1
TRAM1-205ENST00000521425 USP26Q9BXU7 913 aa21.27■■□□□ 1
TRAM1-205ENST00000521425 GOLGA6L22H0YM25 854 aa21.27■■□□□ 1
TRAM1-205ENST00000521425 GNAI3P08754 354 aa21.27■■□□□ 1
TRAM1-205ENST00000521425 ERC2O15083 957 aa21.27■□□□□ 0.99
TRAM1-205ENST00000521425 ST18O60284 1047 aa21.27■□□□□ 0.99
TRAM1-205ENST00000521425 KIAA1211Q6ZU35 1233 aa21.26■□□□□ 0.99
TRAM1-205ENST00000521425 RIC3Q7Z5B4 369 aa21.26■□□□□ 0.99
TRAM1-205ENST00000521425 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
TRAM1-205ENST00000521425 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
TRAM1-205ENST00000521425 KRT28Q7Z3Y7 464 aa21.26■□□□□ 0.99
TRAM1-205ENST00000521425 NFATC2IPQ8NCF5 419 aa21.26■□□□□ 0.99
TRAM1-205ENST00000521425 BCL11BQ9C0K0 894 aaPredicted RBP21.26■□□□□ 0.99
TRAM1-205ENST00000521425 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
TRAM1-205ENST00000521425 STRN4Q9NRL3 753 aa21.26■□□□□ 0.99
TRAM1-205ENST00000521425 NEURL4Q96JN8 1562 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 IL25Q9H293 177 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 NAP1L2Q9ULW6 460 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-205ENST00000521425 PTPRCP08575 1304 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 SBNO1A3KN83 1393 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 REC8O95072 547 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 FOSBP53539 338 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 RAPGEF4Q8WZA2 1011 aa21.25■□□□□ 0.99
TRAM1-205ENST00000521425 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
TRAM1-205ENST00000521425 TTC21AQ8NDW8 1320 aa21.23■□□□□ 0.99
TRAM1-205ENST00000521425 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
TRAM1-205ENST00000521425 ERBB4Q15303 1308 aa21.23■□□□□ 0.99
TRAM1-205ENST00000521425 MED14O60244 1454 aa21.23■□□□□ 0.99
TRAM1-205ENST00000521425 PLEKHG1Q9ULL1 1385 aa21.22■□□□□ 0.99
TRAM1-205ENST00000521425 GAS2L3Q86XJ1 694 aa21.22■□□□□ 0.99
TRAM1-205ENST00000521425 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
TRAM1-205ENST00000521425 IGSF1Q8N6C5 1336 aa21.22■□□□□ 0.99
TRAM1-205ENST00000521425 PLEKHO1Q53GL0 409 aaPredicted RBP21.22■□□□□ 0.99
TRAM1-205ENST00000521425 EDC3Q96F86 508 aaKnown RBP21.22■□□□□ 0.99
TRAM1-205ENST00000521425 DLC1Q96QB1 1528 aa21.22■□□□□ 0.99
TRAM1-205ENST00000521425 ADGRB2O60241 1585 aa21.21■□□□□ 0.99
TRAM1-205ENST00000521425 BOLA2Q9H3K6 86 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms