RNA–Protein interactions for RNA: ENST00000521163.5

HDAC2-210, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-210ENST00000521163 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
HDAC2-210ENST00000521163 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
HDAC2-210ENST00000521163 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
HDAC2-210ENST00000521163 SMARCC1Q92922 1105 aaPredicted RBP13.1□□□□□ -0.31
HDAC2-210ENST00000521163 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
HDAC2-210ENST00000521163 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
HDAC2-210ENST00000521163 PROM2Q8N271 834 aa13.09□□□□□ -0.31
HDAC2-210ENST00000521163 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
HDAC2-210ENST00000521163 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
HDAC2-210ENST00000521163 COL5A3P25940 1745 aaPredicted RBP13.08□□□□□ -0.32
HDAC2-210ENST00000521163 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
HDAC2-210ENST00000521163 KDM3BQ7LBC6 1761 aa13.08□□□□□ -0.32
HDAC2-210ENST00000521163 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
HDAC2-210ENST00000521163 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
HDAC2-210ENST00000521163 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
HDAC2-210ENST00000521163 TJP1Q07157 1748 aa13.08□□□□□ -0.32
HDAC2-210ENST00000521163 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
HDAC2-210ENST00000521163 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
HDAC2-210ENST00000521163 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
HDAC2-210ENST00000521163 TEFQ10587 303 aa13.07□□□□□ -0.32
HDAC2-210ENST00000521163 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
HDAC2-210ENST00000521163 ATG3Q9NT62 314 aa13.07□□□□□ -0.32
HDAC2-210ENST00000521163 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
HDAC2-210ENST00000521163 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
HDAC2-210ENST00000521163 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
HDAC2-210ENST00000521163 MCM10Q7L590 875 aa13.06□□□□□ -0.32
HDAC2-210ENST00000521163 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
HDAC2-210ENST00000521163 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
HDAC2-210ENST00000521163 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
HDAC2-210ENST00000521163 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
HDAC2-210ENST00000521163 SIK1P57059 783 aa13.05□□□□□ -0.32
HDAC2-210ENST00000521163 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
HDAC2-210ENST00000521163 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
HDAC2-210ENST00000521163 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
HDAC2-210ENST00000521163 RIPK4P57078 832 aa13.04□□□□□ -0.32
HDAC2-210ENST00000521163 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
HDAC2-210ENST00000521163 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
HDAC2-210ENST00000521163 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
HDAC2-210ENST00000521163 NBPF14Q5TI25 921 aa13.03□□□□□ -0.32
HDAC2-210ENST00000521163 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
HDAC2-210ENST00000521163 MYH14Q7Z406 1995 aaKnown RBP13.02□□□□□ -0.32
HDAC2-210ENST00000521163 APAF1O14727 1248 aa13.02□□□□□ -0.33
HDAC2-210ENST00000521163 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
HDAC2-210ENST00000521163 KCNQ4P56696 695 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 ITPK1Q13572 414 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 TTC5Q8N0Z6 440 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
HDAC2-210ENST00000521163 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
HDAC2-210ENST00000521163 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HDAC2-210ENST00000521163 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
HDAC2-210ENST00000521163 ATP6V1AP38606 617 aa13□□□□□ -0.33
HDAC2-210ENST00000521163 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
HDAC2-210ENST00000521163 NEUROD2Q15784 382 aa13□□□□□ -0.33
HDAC2-210ENST00000521163 SLC15A2Q16348 729 aa13□□□□□ -0.33
HDAC2-210ENST00000521163 ZNF827Q17R98 1081 aa13□□□□□ -0.33
HDAC2-210ENST00000521163 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
HDAC2-210ENST00000521163 FAM9BQ8IZU0 186 aa13□□□□□ -0.33
HDAC2-210ENST00000521163 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
HDAC2-210ENST00000521163 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
HDAC2-210ENST00000521163 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
HDAC2-210ENST00000521163 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
HDAC2-210ENST00000521163 MIER1Q8N108 512 aa12.99□□□□□ -0.33
HDAC2-210ENST00000521163 LINC00116Q8NCU8 138 aa12.99□□□□□ -0.33
HDAC2-210ENST00000521163 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
HDAC2-210ENST00000521163 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
HDAC2-210ENST00000521163 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
HDAC2-210ENST00000521163 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
HDAC2-210ENST00000521163 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
HDAC2-210ENST00000521163 LRP5O75197 1615 aa12.97□□□□□ -0.33
HDAC2-210ENST00000521163 COL24A1Q17RW2 1714 aa12.96□□□□□ -0.33
HDAC2-210ENST00000521163 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
HDAC2-210ENST00000521163 KCNQ3O43525 872 aa12.96□□□□□ -0.33
HDAC2-210ENST00000521163 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
HDAC2-210ENST00000521163 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
HDAC2-210ENST00000521163 AK7Q96M32 723 aa12.96□□□□□ -0.33
HDAC2-210ENST00000521163 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
HDAC2-210ENST00000521163 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
HDAC2-210ENST00000521163 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
HDAC2-210ENST00000521163 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
HDAC2-210ENST00000521163 CHL1O00533 1208 aa12.94□□□□□ -0.34
HDAC2-210ENST00000521163 GNPATO15228 680 aa12.94□□□□□ -0.34
HDAC2-210ENST00000521163 CRKLP46109 303 aaKnown RBP12.94□□□□□ -0.34
HDAC2-210ENST00000521163 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
HDAC2-210ENST00000521163 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
HDAC2-210ENST00000521163 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
HDAC2-210ENST00000521163 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
HDAC2-210ENST00000521163 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
HDAC2-210ENST00000521163 ZNF853P0CG23 659 aa12.93□□□□□ -0.34
HDAC2-210ENST00000521163 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
HDAC2-210ENST00000521163 SSFA2P28290 1259 aa12.93□□□□□ -0.34
HDAC2-210ENST00000521163 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
HDAC2-210ENST00000521163 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
HDAC2-210ENST00000521163 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
HDAC2-210ENST00000521163 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
HDAC2-210ENST00000521163 IL16Q14005 1332 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms